Job Description P60611 Confidence 99.88% Date Tue Jul 17 17:05:12 BST 2012 Rank 71 Aligned Residues 112 % Identity 22% Template c1p2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	I	I	D	D	E	P	L	A	R	N	E	L	T	Y	L	L	N	E	I	G	G	F	E	E	I	N	E	A	E	N	V	K	E	T	L	E	A	L	L	I	N	Q	Y	D	I	I	F	L	D	V	N	L	M	D	E	N	G	I	E	L	G	A	K	I	Q	K	M	K	E	P	P	A	I	I	F	A	T
Query Conservation
Alig confidence																										.	.	.													.	.
Template Conservation																										.	.	.													.	.
Template Sequence		K	I	A	V	V	D	D	D	K	N	I	L	K	K	V	S	E	K	L	Q	Q	L	G	R	.	.	.	V	K	T	F	L	T	G	E	D	F	L	N	.	.	D	E	E	A	F	H	V	V	V	L	D	V	X	L	P	D	Y	S	G	Y	E	I	C	R	X	I	K	E	T	R	P	E	T	W	V	I	L	L	T
Template Known Secondary structure								S													T	T	T			.	.	.					S	S							.	.			S			S						S	B		S	S	S	B													T	T	S
Template Predicted Secondary structure																										.	.	.													.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		A	H	D	Q	.	.	Y	A	V	Q	A	F	E	L	N	A	T	D	Y	I	L	K	P	F	G	Q	K	R	I	E	Q	A	V	N	K	V	R	A	T
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		L	L	S	D	D	E	S	V	L	K	G	F	E	A	G	A	D	D	Y	V	T	K	P	F	N	P	E	I	L	L	A	R	V	K	R	F	L	E	R
Template Known Secondary structure		S			S											T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions