Job Description O34090 Confidence 28.40% Date Tue Jul 17 17:05:02 BST 2012 Rank 66 Aligned Residues 152 % Identity 14% Template c4eq9A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter substrate-binding protein-amino acid PDBTitle: 1.4 angstrom crystal structure of putative abc transporter substrate-2 binding protein from streptococcus pneumoniae strain canada mdr_19a3 in complex with glutathione Resolution 1.40 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L	K	D	V	P	S	V	I	P	E	G	L	T	L	G	C	I	P	D	R	E	L	P	F	D	A	Y	I	S	K	T	H	T	P	L	S	Q	L	P	E	G	S	I	I	G	T	.	.	.	.	.	.	.	S	S	L	R	R	G	A	Q	I
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	V	F	A	G	L	D	A	D	R	Y	N	M	A	V	N	N	L	S	Y	T	K	E	R	A	E	K	Y	L	Y	A	A	P	I	A	Q	N	P	N	V	L	V	V	K	K	D	D	S	S	I	K	S	L	D	D	I	G	G	K	S	T	E	V	V	Q	A	T	T	S	A	K	Q	L	E	A	Y	N	A	E
Template Known Secondary structure										T	T	S		S				S	S																												T	T			S		S	S	G	G	G		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K	Y	P	N	L	E	I	K	W	I	R	G	N	I	D	T	R	L	E	K	L	Q	T	E	D	Y	D	A	I	I	L	A	A	A	G	L	R	R	M	G	W	S	D	D	I	V	T	S	Y	L	D	R	D	T	L	L	P	A	I	G	Q	G	A	L	G	I	E	C	R	S	D	D	E	E	L	L	T	L
Query Conservation
Alig confidence												.																																											.	.	.
Template Conservation												.																																											.	.	.
Template Sequence		H	T	D	N	P	T	I	L	N	Y	.	T	K	A	D	F	Q	Q	I	M	V	R	L	S	D	G	Q	F	D	Y	K	I	F	D	K	I	G	V	E	T	V	I	K	N	Q	G	L	D	N	L	K	V	I	.	.	.	E	L	P	S	D	Q	Q	P	Y	V	Y	P	L	L	A	Q	G	Q	D	E	L	K	S	F
Template Known Secondary structure			T	T	S							.														T	T	S	S	S																	T		T	T					.	.	.					S	S										T	T
Template Predicted Secondary structure												.																																											.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		215	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		243	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions