Job Description O34090 Confidence 93.81% Date Tue Jul 17 17:05:02 BST 2012 Rank 19 Aligned Residues 206 % Identity 16% Template c3up9A_ PDB info PDB header:methionine-binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative lipoprotein (actodo_00931) from2 actinomyces odontolyticus atcc 17982 at 2.35 a resolution Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L
Query Conservation
Alig confidence																														.	.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	T	L	T	V	G	A	T	P	S	P	H	A	K	I	L	T	Y	I	N	D	N	L	A	A	D	A	.	.	G	I	K	L	D	I	V	E	Y	.	T	D	Y	V	Q	P	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	N	D	G	D	L	D	A	N	F	Y	Q	T
Template Known Secondary structure											T	T	T												T					.	.	T									.	S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	S		S
Template Predicted Secondary structure																														.	.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.																			.	.	.	.	.	.	.	90	.	.	.	.	.	.
		81	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure									.	.																																								.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																																								.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		K	D	V	P	S	V	I	.	.	P	E	G	L	T	L	G	C	I	P	D	R	E	L	P	F	D	A	Y	I	S	K	T	H	T	P	L	S	Q	L	P	E	G	S	I	I	G	T	S	.	.	.	S	L	R	R	G	A	Q	I	L	S	K	Y	P	N	L	E	I	K	W	I	.	.	.	.	.	.	.	.	.
Query Conservation									.	.																																								.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																								.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	Y	L	E	N	A	E	K	Q	F	G	Y	N	F	E	A	G	E	G	I	H	L	E	P	L	G	V	F	S	N	K	H	K	S	L	D	E	L	P	D	G	G	T	I	G	I	I	S	D	T	A	N	Q	S	R	A	L	E	L	L	A	T	Q	G	L	V	S	I	P	E	G	D	V	N	I	N	T	V	T
Template Known Secondary structure																																S	S		S		G	G	G			T	T								S														T	T	S									S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
								147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	G	N	I	D	T	R	L	E	K	L	Q	T	E	D	Y	D	A	I	I	L	A	A	A	G	L	R	R	M	G	W	S	D	D	I	V	T	S	Y	L	D	R	D	T	L	L	P	A	I	G	Q	G	A	L	G	I	E	C	R	S	D	D	E	E	L	L	T	L	L	S	K	V	H	N
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																				.
Template Conservation																																											.
Template Sequence		K	L	K	N	F	D	F	R	E	V	E	G	P	Q	L	V	R	S	L	D	D	F	D	Y	A	V	I	N	G	N	F	A	Q	E	G	G	K	T	I	S	G	.	D	A	L	V	V	E	S	P	V	D	N	P	A	V	N	V	L	V	W	K	G	D	S	K	K	V	D	A	I	A	K	L	E	K	L	L	H	S
Template Known Secondary structure			S	S	S								G	G	G					T	T	T	S	S												T	T						.			S						T	T											T	T		T	T												T	S
Template Predicted Secondary structure																																											.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	A	K	C	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	V	K	Q	Y	I	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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