Job Description O34090 Confidence 30.37% Date Tue Jul 17 17:05:02 BST 2012 Rank 61 Aligned Residues 56 % Identity 20% Template c3r6uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:choline-binding protein; PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis Resolution 1.61 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		R	K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	.	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I
Query Conservation																											.
Alig confidence																											.			.	.											.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.											.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	I	K	I	G	A	Q	S	M	S	E	S	E	I	I	A	S	M	L	G	Q	L	I	E	H	H	T	.	.	D	L	K	T	T	T	I	K	N	L	.	.	G	S	N	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	Q	A	L	M	N	G	E	I	D	I	A	A
Template Known Secondary structure										S	S																		S	.	.	S										.	.		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S		S
Template Predicted Secondary structure																														.	.											.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.			50	.	.	.	.																	.	.	.	.	.	60	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions