Job Description O34090 Confidence 16.27% Date Tue Jul 17 17:05:02 BST 2012 Rank 94 Aligned Residues 56 % Identity 13% Template c3pppA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glycine betaine/carnitine/choline-binding protein; PDBTitle: structures of the substrate-binding protein provide insights into the2 multiple compatible solutes binding specificities of bacillus3 subtilis abc transporter opuc Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I
Query Conservation
Alig confidence																											.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	K	I	G	A	Q	S	M	T	E	S	E	I	V	A	N	M	I	A	Q	L	I	E	H	.	.	.	D	T	D	L	N	T	A	L	V	K	N	L	G	S	N	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	Q	A	M	L	G	G	D	I	D	I	S	A
Template Known Secondary structure									S	S																	.	.	.			S											S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S		S
Template Predicted Secondary structure																											.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.																	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions