Job Description O34090 Confidence 38.86% Date Tue Jul 17 17:05:02 BST 2012 Rank 56 Aligned Residues 65 % Identity 11% Template c3oxnD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: the crystal structure of a putative transcriptional regulator from2 vibrio parahaemolyticus Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L	K
Query Conservation
Alig confidence									.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	F	T	I	A	T	.	T	D	Y	A	X	Q	T	I	L	P	F	A	L	P	R	I	Y	Q	E	A	P	N	V	S	F	N	F	L	P	L	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	L	S	D	Q	L	T	Y	E	G	A	D	L	A	I	C	R	P	T
Template Known Secondary structure									.							T														T	T										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G							T	S			S							S
Template Predicted Secondary structure									.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		82	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	S	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	V	E	P	L
Template Known Secondary structure		S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions