Job Description O34090 Confidence 39.50% Date Tue Jul 17 17:05:02 BST 2012 Rank 54 Aligned Residues 112 % Identity 13% Template c3n5lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter; PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution Resolution 1.97 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																		.	.	.																.	.	.	.	.	.											.	.	.	.
Query SS confidence																									.	.																		.	.	.																.	.	.	.	.	.											.	.	.	.
Query Sequence		E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L	K	D	V	P	S	.	.	V	I	P	E	G	L	T	L	G	C	I	P	D	R	E	L	P	.	.	.	F	D	A	Y	I	S	K	T	H	T	P	L	S	Q	L	.	.	.	.	.	.	P	E	G	S	I	I	G	T	S	S	.	.	.	.
Query Conservation																									.	.																		.	.	.																.	.	.	.	.	.											.	.	.	.
Alig confidence																									.	.																		.	.	.																.	.	.	.	.	.											.	.	.	.
Template Conservation
Template Sequence		G	I	I	Q	G	X	R	F	D	K	V	D	I	A	W	Y	G	N	K	A	A	X	E	A	V	D	R	A	H	G	E	I	F	A	Q	T	V	A	A	S	G	A	P	G	Y	W	S	L	L	I	A	N	K	D	S	K	I	D	S	L	E	D	X	L	A	N	A	K	S	L	T	F	G	N	G	D	P	N	S	T
Template Known Secondary structure									T	T	S		S																S											T	T			S										T	T		S			S							T	G	G	G								T	T		T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
						128	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.	.	.														.	.	.	.
Query SS confidence		.	.	.	.														.	.	.	.
Query Sequence		.	.	.	.	L	R	R	G	A	Q	I	L	S	K	Y	P	N	.	.	.	.	L	E	I	K	W	I	R	G	N	I	D	T	R	L	E	K	L	Q	T	E	D	Y	D	A	I	I	L	A	A	A	G	L	R	R	M
Query Conservation		.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.					.
Template Conservation																											.
Template Sequence		S	G	Y	L	V	P	G	Y	Y	V	F	A	K	N	N	V	D	P	V	K	A	F	K	R	T	.	L	N	S	S	H	E	V	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	F	N	T	E	G	X	E	R	L
Template Known Secondary structure		T	T	T							T	T	T	T	T	T							S	S			.														T	T	S	S	S
Template Predicted Secondary structure																											.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions