Job Description O34090 Confidence 15.32% Date Tue Jul 17 17:05:02 BST 2012 Rank 97 Aligned Residues 61 % Identity 15% Template c3k6gA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:telomeric repeat-binding factor 2-interacting protein 1; PDBTitle: crystal structure of rap1 and trf2 complex Resolution 1.95 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																									.	.	.																							.	.	.	.
Query SS confidence																									.	.	.																							.	.	.	.
Query Sequence		S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	.	.	.	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	.	.	.	.	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N
Query Conservation																									.	.	.																							.	.	.	.
Alig confidence																					.				.	.	.																							.	.	.	.
Template Conservation																					.
Template Sequence		S	Q	P	E	V	G	A	A	I	K	I	I	R	Q	L	X	E	K	F	.	N	L	D	L	S	T	V	T	Q	A	F	L	K	N	S	G	E	L	E	A	T	S	A	F	L	A	S	G	Q	R	A	D	G	Y	P	I	W	S	R	Q	D	D	I	D	L	Q	K	D	D
Template Known Secondary structure																				T	.	T													T	T	T												S	S		T	T	S													T
Template Predicted Secondary structure																					.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions