Job Description O34090 Confidence 69.98% Date Tue Jul 17 17:05:02 BST 2012 Rank 38 Aligned Residues 63 % Identity 13% Template c3fd3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:chromosome replication initiation inhibitor protein; PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58. Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L	K	D
Query Conservation
Alig confidence																			.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	N	I	A	T	N	A	D	S	L	G	T	W	F	L	D	.	A	V	S	K	F	T	G	G	S	D	.	Y	L	V	N	I	A	V	D	D	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	V	E	W	L	R	G	G	R	V	L	A	A	V	T	A	H	D	K
Template Known Secondary structure													T	T	T				.								T	S	S	.										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S		S					S			S
Template Predicted Secondary structure																			.											.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.																					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		83	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	S	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	Q	G	C
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions