Job Description O34090 Confidence 29.43% Date Tue Jul 17 17:05:02 BST 2012 Rank 63 Aligned Residues 193 % Identity 13% Template c2uyeA_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulatory protein; PDBTitle: double mutant y110s,f111v dntr from burkholderia sp. strain2 dnt in complex with thiocyanate Resolution 2.2 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L	K
Query Conservation
Alig confidence									.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	F	N	L	A	M	.	T	D	I	G	E	M	S	V	M	P	P	L	M	E	A	L	A	Q	R	A	P	H	I	Q	I	S	T	L	R	P	N	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	E	D	M	E	S	G	A	V	D	L	A	L	G	L	L	P
Template Known Secondary structure									.																					T	T								T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S								T
Template Predicted Secondary structure									.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		D	V	P	S	V	I	P	E	G	L	T	L	G	C	I	P	D	R	E	L	P	F	D	A	Y	I	S	K	T	H	T	P	L	S	Q	L	P	E	G	S	I	I	G	T	S	S	.	.	.	.	.	L	R	R	G	A	Q	I	L	S	K	Y	P	N	L	E	I	K	W	I	R	G	N	I	D	T	R	L	E	K
Query Conservation																																																.	.	.	.	.
Alig confidence																																																.	.	.	.	.
Template Conservation
Template Sequence		E	L	Q	T	G	F	F	Q	R	R	L	F	R	H	R	Y	V	C	M	F	R	K	D	H	P	S	A	K	S	P	M	S	L	K	Q	F	S	E	L	E	H	V	G	V	V	A	L	N	T	G	H	G	E	V	D	G	L	L	E	R	A	G	I	K	R	R	M	R	L	V	V	P	H	F	I	A	I	G	P	I
Template Known Secondary structure		T			T	T																	T	T		S	S			S	S									S								T	T	S	G	G	G	G								T	T										S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	T	E	D	Y	D	A	I	I	L	A	A	A	G	L	R	R	M	G	W	S	D	D	I	V	T	S	Y	L	D	R	D	T	L	L	P	A	I	G	Q	G	A	L	G	I	E	C	R	S	D	D	E	E	L	L	T	L	L	S	K	V
Query Conservation
Alig confidence																								.			.	.
Template Conservation																								.			.	.
Template Sequence		L	H	S	T	D	L	I	A	T	V	P	Q	R	F	A	V	R	C	E	V	P	F	.	G	L	.	.	T	T	S	P	H	P	A	K	L	P	D	I	A	I	N	L	F	W	H	A	K	Y	N	R	D	P	G	N	M	W	L	R	Q	L	F
Template Known Secondary structure				T	S	S		B																.	T		.	.						S	S													G	G	G	T	T
Template Predicted Secondary structure																								.			.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions