 |
| Job Description | O34090 | | Confidence | 27.42% | Date | Tue Jul 17 17:05:02 BST 2012 |
| Rank | 68 | Aligned Residues | 40 |
| % Identity | 13% | Template | c2ql3G_ |
| PDB info |
PDB header:transcription | Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; |
PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1
|
| Resolution | 2.05 Å |
|
|   |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | R | R | G | A | Q | I | L | S | K | Y | P | N | L | E | I | K | W | I | R | G | N | I | D | T | R | L | E | K | L | Q | T | E | D | Y | D | A | I | I | L |
| Query Conservation |   |
  |
|
|   |
|
|
|   |   |   |   |
|
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
| Template Sequence |   |
P | S | X | L | Y | A | F | T | A | E | Y | P | R | A | S | V | E | F | R | E | D | T | Q | N | R | L | R | T | Q | L | E | G | G | E | L | D | V | A | I | V |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|