Job Description O34090 Confidence 43.74% Date Tue Jul 17 17:05:02 BST 2012 Rank 50 Aligned Residues 72 % Identity 18% Template c1twyG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of an abc-type phosphate transport receptor from2 vibrio cholerae Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	V	G	S	R	R	S	K	L	A	L	T	Q	S	Q	Q	F	I	D	K	L	K	A	V	E	P	N	L	E	I	E	I	K	E	I	V	T	K	G	D	R	I	V	D	K	Q	L	S	K	V	G	G	K	G	L	F	V	K	E	I	Q	H	E	L	F	E	K	N	I	D	M	A	I	H	S	L	K	D
Query Conservation
Alig confidence																	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	T	I	S	G	S	T	S	V	A	R	I	X	D	.	.	V	L	A	E	K	Y	N	Q	Q	H	P	E	T	Y	V	A	V	Q	G	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	G	I	S	L	L	K	K	G	V	A	D	I	A	X	T	S	R	Y	L
Template Known Secondary structure																	.	.											T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S		S					S	S
Template Predicted Secondary structure																	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	S	V	I	P	E	G	L	T	L	G	C	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	S	E	A	Q	N	T	L	H	T	F	T	L
Template Known Secondary structure			T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions