Job Description O50581 Confidence 96.24% Date Tue Jul 17 17:05:03 BST 2012 Rank 245 Aligned Residues 88 % Identity 18% Template d1jmca1 SCOP info OB-fold Nucleic acid-binding proteins Single strand DNA-binding domain, SSB Resolution 2.40

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		50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.
Predicted Secondary structure												.																							.	.	.																							.	.																.
Query SS confidence												.																							.	.	.																							.	.																.
Query Sequence		T	V	I	D	L	N	Q	A	E	D	.	Q	S	N	V	T	I	E	G	Q	V	Y	T	A	P	V	V	A	F	F	G	R	N	.	.	.	K	S	K	L	T	V	H	L	M	V	N	N	I	A	V	K	C	I	F	F	N	Q	.	.	P	Y	L	K	K	K	I	E	L	N	Q	T	I	T	V	.	K	G	K	W
Query Conservation												.																							.	.	.																							.	.																.
Alig confidence												.																							.	.	.																							.	.																.
Template Conservation
Template Sequence		K	V	V	P	I	A	S	L	T	P	Y	Q	S	K	W	T	I	C	A	R	V	T	N	K	S	Q	I	R	T	W	S	N	S	R	G	E	G	K	L	F	S	L	E	L	V	D	E	S	G	E	I	R	A	T	A	F	N	E	Q	V	D	K	F	F	P	L	I	E	V	N	K	V	Y	Y	F	S	K	G	T	L
Template Known Secondary structure			B			G	G	G			T	T																						S	S													S	S																G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	V	K	Q	E	I	T	G	N	R	V	F	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	A	N	K	Q	F	T	A	V	K	N	D	Y	E
Template Known Secondary structure						G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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