Job Description O50581 Confidence 97.39% Date Tue Jul 17 17:05:03 BST 2012 Rank 184 Aligned Residues 101 % Identity 18% Template c3vkwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:replicase large subunit; PDBTitle: crystal structure of the superfamily 1 helicase from tomato mosaic2 virus Resolution 1.90 Å

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		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	A	I	C	M	Y	A	L	K	T	A	G	Y	Q	S	A	L	M	V	P	T	E	I	L	A	E	Q	H	A	E	S	L	M	A	L	F	G	D	S	M	N	V	A	L	L	T	G	S	V	K	G	K	K	R	K	I	L	L	E	Q	L	E	N	G	T	I
Query Conservation
Alig confidence																					.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	D	G	V	P	G	C	G	K	T	K	E	I	L	S	R	V	.	.	.	.	.	N	F	E	E	D	L	I	L	V	P	G	R	Q	A	A	E	M	I	R	R	R	A	N	A	S	G	I	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K
Template Known Secondary structure								T	T	S											.	.	.	.	.		T	T	T						S													T	T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																					.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		829	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.						.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.																									.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.			.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		D	C	L	I	G	T	H	A	L	I	Q	D	D	V	I	F	H	N	V	.	.	G	L	V	I	T	D	E	Q	H	R	F	G	V	N	Q	R	Q	L	L	R	E	K	G	A	M	T	N	V	L	F	M
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		D	N	V	R	T	V	D	S	F	L	M	N	Y	G	K	G	A	R	C	Q	F	K	R	L	F	I	D	E	G	L	M	L	H	T	G	C	V	N	F	L	V	E	M	S	L	C	D	I	A	Y	V	Y
Template Known Secondary structure		T	T										T	T	T	S	S						S						T	G	G	G	S												T	T		S
Template Predicted Secondary structure
Template SS confidence
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions