Job Description O50581 Confidence 94.14% Date Tue Jul 17 17:05:03 BST 2012 Rank 347 Aligned Residues 63 % Identity 19% Template c3vdyA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:single-stranded dna-binding protein ssbb; PDBTitle: b. subtilis ssbb/ssdna Resolution 2.80 Å

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Show / Hide Conservation and Alignment quality

		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.												.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		N	V	T	I	E	G	Q	V	Y	T	A	P	V	V	A	F	F	G	R	N	K	S	K	L	T	V	H	L	M	V	N	.	.	.	.	.	.	.	.	.	.	.	N	I	A	V	K	C	I	F	F	N	Q	.	.	P	Y	L	K	K	K	I	E	L	N	Q	T	I	T	V	K	G	K	W	N	R
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		Q	V	M	L	V	G	R	L	T	K	D	P	D	L	R	Y	T	S	A	G	A	A	V	A	H	V	T	L	A	V	N	R	S	F	K	N	A	S	G	E	I	E	A	D	Y	V	N	C	T	L	W	R	K	T	A	E	N	T	A	L	Y	C	Q	K	G	S	L	V	G	V	S	G	R	I	Q	T
Template Known Secondary structure										S	S								T	T	S													S	S			S	S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions