Return to main results Retrieve Phyre Job Id

Job DescriptionO50581
Confidence94.33%DateTue Jul 17 17:05:03 BST 2012
Rank340Aligned Residues69
% Identity20%Templatec3u44B_
PDB info PDB header:hydrolase/dnaChain: B: PDB Molecule:atp-dependent helicase/deoxyribonuclease subunit b; PDBTitle: crystal structure of addab-dna complex
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   288.290.........300.........310.... .....320.........330.........340.........350.........360....
Predicted Secondary structure 







...












Query SS confidence 


























. . .

















































Query Sequence  RLLQGDVGSGKTVVAAICMYALKTAGY. . . QSALMVPTEILAEQHAESLMALFGDSMNVALLTGSVKGKKRKILLEQLEN
Query Conservation   

 
 





 

    
     
 ...







  

 
    
       
 
 

 
      
      
  
Alig confidence 


























...





.


















........................
Template Conservation   

 
 





  
   
  

         


 .
   
 
   

   
   ........................
Template Sequence  EFLVGRSGSGKTKLIINSIQDELRRAPFGKPIIFLV. PDQMTFLMEYELAKTPDMG. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TTSS
TTSS

.
GGGT

SS
S........................
Template Predicted Secondary structure 









.........................
Template SS confidence 















































































   4.....10.........20.........30......... 40.........50........
 
   365....370.........380.
Predicted Secondary structure 





Query SS confidence 
















Query Sequence  GTIDCLIGTHALIQDDV
Query Conservation 
   




   
   
Alig confidence 
















Template Conservation        
 
 


   
Template Sequence  GMIRAQVFSFSRLAWRV
Template Known Secondary structure  S
SS
Template Predicted Secondary structure 




Template SS confidence 
















   5960.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions