Job Description O50581 Confidence 92.29% Date Tue Jul 17 17:05:03 BST 2012 Rank 416 Aligned Residues 63 % Identity 11% Template c3pgzB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of a single strand binding protein (ssb) from2 bartonella henselae Resolution 2.10 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.															90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		N	V	T	I	E	G	Q	V	Y	T	A	P	V	V	A	F	F	G	R	N	K	S	K	L	T	V	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	N	N	I	A	V	K	C	I	F	F	N	Q	P	.	.	.	Y	L	K	K	K	I	E	L	N	Q	T	I	T	V	K	G	K	W	N	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		K	V	I	L	I	G	N	L	G	A	D	P	E	I	R	R	L	N	S	G	D	Q	V	A	N	L	R	I	A	T	S	E	S	W	R	D	R	N	T	N	E	R	K	E	R	T	E	W	H	N	I	V	I	F	N	E	N	L	V	K	V	V	E	Q	Y	L	K	K	G	S	K	I	Y	I	E	G	Q	L	Q	T
Template Known Secondary structure										S	S								T	T	S																	T	T	T																													T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions