Job Description O50581 Confidence 99.90% Date Tue Jul 17 17:05:03 BST 2012 Rank 62 Aligned Residues 174 % Identity 22% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310								.	.	.	.	.	.	.
Predicted Secondary structure																					.																																															.	.	.	.	.	.	.
Query SS confidence																					.																																															.	.	.	.	.	.	.
Query Sequence		E	I	D	Y	D	I	D	Q	V	K	S	F	I	D	R	L	P	F	E	.	L	T	E	A	Q	K	S	S	V	N	E	I	F	R	D	L	K	A	P	I	R	M	H	R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	A	I	C	M	Y	A	L	K	.	.	.	.	.	.	.	T	A	G	Y	Q	S	A
Query Conservation																					.																																															.	.	.	.	.	.	.
Alig confidence																.					.															.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																.																				.	.	.	.	.	.
Template Sequence		S	F	L	V	N	E	N	T	L	K	A	I	K	E	.	M	G	F	T	N	M	T	E	I	Q	H	K	S	I	R	P	L	L	E	.	.	.	.	.	.	G	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L
Template Known Secondary structure																.	T	T			B															.	.	.	.	.	.	T									T	T	S																	T	T			G	G	G
Template Predicted Secondary structure																.																				.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.							.	.	.	.	.	.	.	.	390
Predicted Secondary structure																								.																																											.	.	.	.	.	.
Query SS confidence																								.																																											.	.	.	.	.	.
Query Sequence		L	M	V	P	T	E	I	L	A	E	Q	H	A	E	S	L	M	A	L	F	G	D	.	S	M	N	V	A	L	L	T	G	S	V	K	G	K	K	R	K	I	L	L	E	Q	L	E	N	G	T	I	D	C	L	I	G	T	H	A	L	I	Q	D	D	V	.	.	.	.	.	.	I	F	H	N	V	G	L	V	I
Query Conservation																								.																																											.	.	.	.	.	.
Alig confidence																								.																							.	.	.	.																	.	.	.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		I	L	S	P	T	R	E	L	A	M	Q	T	F	G	V	L	K	E	L	M	T	H	H	V	H	T	Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	.	.	.	.	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	P	G	F	M	Y	K	N	L	Q	C	L	V
Template Known Secondary structure					S	S															T	T	T			S							S	S	S												.	.	.	.			S																	T	T				T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		391	.	.	.	.	.						.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		T	D	E	Q	H	R	.	.	.	.	.	F	G	V	N	Q	R	Q	L	L	R	E	K	G	A	M	T	N	V	L	F	M	T	A	T	P	I	P	R	T	L	A	I	S	V
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.
Template Conservation
Template Sequence		I	D	E	A	D	R	I	L	D	V	G	F	E	E	E	L	K	Q	I	I	K	L	L	P	T	R	R	Q	T	M	L	F	S	A	T	Q	T	R	K	V	E	D	L	A	R
Template Known Secondary structure				S							T	T												S		S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions