Job Description O50581 Confidence 98.40% Date Tue Jul 17 17:05:03 BST 2012 Rank 148 Aligned Residues 135 % Identity 13% Template c3ezkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna packaging protein gp17; PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions Resolution 34.00 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	P	F	E	L	T	E	A	Q	K	S	S	V	N	E	I	F	R	D	L	K	A	P	I	R	M	H	R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	A	I	C	M	Y	A	L	K	T	.	.	A	G	Y	Q	S	A	L	M	V	P	T	E	I	L	A	E	Q	H	A	E	S	L	M	A	L	F	G
Query Conservation																																																					.	.
Alig confidence																				.	.	.	.	.	.																												.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		I	K	V	Q	L	R	D	Y	Q	R	D	M	L	K	I	M	S	S	.	.	.	.	.	.	K	R	M	T	V	C	N	L	S	R	Q	L	G	K	T	T	V	V	A	I	F	L	A	H	F	V	C	F	N	K	D	K	A	V	G	I	L	A	H	K	G	S	M	S	A	E	V	L	D	R	T	K	Q	A	I	E
Template Known Secondary structure																				.	.	.	.	.	.		S								T	T	S		T															S	S	S								S	S																T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		339	340														.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Query Sequence		D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	V	A	L	L	T	G	S	V	K	G	K	K	R	K	I	L	L	E	Q	L	E	N	G	T	I	D	C	L	I	G	T	H	A	L	I	Q	D	D	V	I	F	H	N	V	G	L	V	I	T	D	E	Q	H	R	F	G	V	.	.	N	Q	R	Q
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		L	L	P	D	F	L	Q	P	G	I	V	E	W	N	K	G	S	I	E	L	D	N	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	G	A	Y	A	S	S	P	D	A	V	R	G	.	.	.	.	N	S	F	A	M	I	Y	I	D	E	C	A	F	I	P	N	F	H	D	S	W	L
Template Known Secondary structure		T	S		T	T	T	S				S				T	T					T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	S			S						S	G	G	G		S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		404	.	.				.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		L	L	R	.	.	.	E	K	G	A	M	T	N	V	L	F	M	T	A	T	P	I
Query Conservation					.	.	.
Alig confidence					.	.	.													.
Template Conservation																				.
Template Sequence		A	I	Q	P	V	I	S	S	G	R	R	S	K	I	I	I	T	T	.	T	P	N
Template Known Secondary structure									S	S	S									.
Template Predicted Secondary structure																				.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions