Job Description O50581 Confidence 97.89% Date Tue Jul 17 17:05:03 BST 2012 Rank 168 Aligned Residues 92 % Identity 10% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																																							.
Query SS confidence																																		.	.	.	.																																							.
Query Sequence		V	I	D	L	N	Q	A	E	D	Q	S	N	V	T	I	E	G	Q	V	Y	T	A	P	V	V	A	F	F	G	R	N	K	.	.	.	.	S	K	L	T	V	H	L	M	V	N	N	I	A	V	K	C	I	F	F	N	Q	P	Y	L	K	K	K	I	E	L	N	Q	T	I	T	V	K	G	.	K	W	N	R	V
Query Conservation																																		.	.	.	.																																							.
Alig confidence																																		.	.	.	.																								.															.
Template Conservation																																																													.
Template Sequence		T	Y	N	I	G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	N	L	T	.	D	I	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E	G	Y
Template Known Secondary structure					G	G	G			S	S																					T	T	S													T	T									G	G	G	G	.	G	S				T	T													T
Template Predicted Secondary structure																																																													.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	E	I	T	G	N	R	V	F	F	N	S	Q	G	T	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	G	L	E	C	T	A	N	Y	V	E	I	L	K	K	G	E
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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