Job Description O50581 Confidence 97.46% Date Tue Jul 17 17:05:03 BST 2012 Rank 179 Aligned Residues 121 % Identity 16% Template c2z4rB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa Resolution 3.05 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																											.																														.
Query SS confidence																											.																														.
Query Sequence		F	E	L	T	E	A	Q	K	S	S	V	N	E	I	F	R	D	L	K	A	P	I	R	M	H	.	R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	A	I	C	M	Y	A	L	K	T	A	G	Y	Q	S	.	A	L	M	V	P	T	E	I	L	A	E	Q	H	A	E	S	L	M	A	L	F	G	D	S
Query Conservation																											.																														.
Alig confidence																											.																														.																						.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		F	V	V	G	P	G	N	S	F	A	Y	H	A	A	L	E	V	A	K	H	P	G	R	Y	N	P	L	F	I	Y	G	G	V	G	L	G	K	T	H	L	L	Q	S	I	G	N	Y	V	V	Q	N	E	P	D	L	R	V	M	Y	I	T	S	E	K	F	L	N	D	L	V	D	S	M	K	E	G	K	.	.	.
Template Known Secondary structure						T	T	T													S	T	T	T	S								S	S	S	S	S																S	S	S	S																				T	S		.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.							.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		M	N	V	A	L	L	T	G	S	V	K	G	K	K	R	K	I	L	L	E	Q	L	E	N	G	T	I	D	C	L	I	G	T	H	A	L	I	Q	D	D	V	I	F	H	N	V	G	L	V	I	T	D	E	Q	H	R	F	G	V	N	Q	R	.	.	.	.	.	.	Q	L	L	R	E	K	G	A	M	T	N	V
Query Conservation																																																																.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	E	F	R	E	K	Y	R	K	K	V	D	I	L	L	I	D	D	V	Q	F	L	I	G	K	T	G	V	Q	T	E	L	F	H	T	F	N	E	L	H	D	S	G	K	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T		S							G	G	G	G	T	T																	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	M	T	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	I	C	S	D
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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