Job Description O50581 Confidence 93.02% Date Tue Jul 17 17:05:03 BST 2012 Rank 396 Aligned Residues 62 % Identity 10% Template c2vw9B_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:single-stranded dna binding protein; PDBTitle: single stranded dna binding protein complex from2 helicobacter pylori Resolution 2.30 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		V	T	I	E	G	Q	V	Y	T	A	P	V	V	A	F	F	G	R	N	K	S	K	L	T	V	H	L	M	V	N	N	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	C	I	F	F	N	Q	.	.	P	Y	L	K	K	K	I	E	L	N	Q	T	I	T	V	K	G	K	W	N	R
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		V	I	M	V	G	R	L	T	R	N	V	E	L	K	Y	L	P	S	G	S	A	A	A	T	I	G	L	A	T	S	R	R	F	K	K	Q	D	G	T	L	G	E	E	V	C	F	I	D	A	R	L	F	G	R	T	A	E	I	A	N	Q	Y	L	S	K	G	S	S	V	L	I	E	G	R	L	T	Y
Template Known Secondary structure									S	S								T	T	S																	S	S	S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		2005	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions