Job Description O50581 Confidence 98.38% Date Tue Jul 17 17:05:03 BST 2012 Rank 153 Aligned Residues 154 % Identity 21% Template c1w36G_ PDB info PDB header:recombination Chain: G: PDB Molecule:exodeoxyribonuclease v alpha chain; PDBTitle: recbcd:dna complex Resolution 3.1 Å

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		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.
Predicted Secondary structure																								.	.																																																		.	.	.	.
Query SS confidence																								.	.																																																		.	.	.	.
Query Sequence		S	D	E	A	I	E	I	D	Y	D	I	D	Q	V	K	S	F	I	D	R	L	P	.	.	F	E	L	T	E	A	Q	K	S	S	V	N	E	I	F	R	D	L	K	A	P	I	R	M	H	R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	A	I	C	M	Y	A	L	K	T	.	.	.	.	A	G	Y
Query Conservation																								.	.																																																		.	.	.	.
Alig confidence																								.	.																	.	.	.	.	.	.																												.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		N	E	V	N	H	A	I	E	V	D	E	A	L	L	A	Q	T	L	D	K	L	F	P	V	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	.	.	.	.	.	.	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C
Template Known Secondary structure		T	S			B															T	T				T	T	S													T	.	.	.	.	.	.	B	S								T	T	S	T															T		S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	A	L	M	V	P	T	E	I	L	A	E	Q	H	A	E	S	L	M	A	L	F	G	D	S	M	N	V	A	L	L	T	G	S	V	K	G	K	K	R	K	I	L	L	E	Q	L	E	N	G	T	I	D	C	L	I	G	T	H	A	L	I	Q	D	D	V	I	F	H	N	V	G	L	V	I	T	D	E	Q
Query Conservation
Alig confidence																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	.	Q	L	P	L	T	D	E	Q	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	P	E	D	A	S	T	L	H	R	L	L	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A
Template Known Secondary structure							B	S	S												T					.	S	T	T			S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S				B	T	T	T	S				T	T	S			S		S						S	G
Template Predicted Secondary structure																										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.																	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	F	G	V	N	Q	R	Q	L	L	R	E	K	G	A	M	T	N	V	L	F	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	P	D	H	A	R	V	I	F
Template Known Secondary structure		G	G		B											S		T	T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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