Job Description O50581 Confidence 96.77% Date Tue Jul 17 17:05:03 BST 2012 Rank 206 Aligned Residues 135 % Identity 15% Template c1jr3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii Resolution 2.70 Å

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		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	T	E	A	Q	K	S	S	V	N	E	I	F	R	D	L	K	A	P	I	R	M	H	.	R	L	L	Q	G	D	V	G	S	G	K	T	V	V	A	A	I	C	M	Y	A	L	K	T	A	G	Y	Q	S	A	L	M	V	P	T	E	I	L	A	E	Q	H	A	E	S	L	M	A	L	F	G	D	S	M	N	V
Query Conservation																									.
Alig confidence																									.																																													.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	.	.	.	.	.	.	G	T	H	P	D	Y
Template Known Secondary structure				T	T										T	T	T	T	T	S				S								T	T	S	S													T		S	S			S	S	S			S		S								T	.	.	.	.	.	.	S			S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.
		344	.	.						.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																																																												.	.	.
Query SS confidence					.	.	.	.	.																																																												.	.	.
Query Sequence		A	L	L	.	.	.	.	.	T	G	S	V	K	G	K	K	R	K	I	L	L	E	Q	L	E	N	G	T	I	D	C	L	I	G	T	H	A	L	I	Q	D	D	V	I	F	H	N	V	G	L	V	I	T	D	E	Q	H	R	F	G	V	N	Q	R	Q	L	L	.	.	.	R	E	K	G	A	M	T	N	V	L
Query Conservation					.	.	.	.	.																																																												.	.	.
Alig confidence					.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F
Template Known Secondary structure								T	T	S	S	S	B													S	S			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							S		G	G	G	B														S			T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		416	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	T	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	A	T	R
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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