Return to main results Retrieve Phyre Job Id

Job DescriptionP60643
Confidence2.59%DateTue Jul 17 17:05:12 BST 2012
Rank30Aligned Residues82
% Identity10%Templated1wpga4
SCOP infoCalcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30....... ..40.........50.. ..... ..60...... ...70.........80...
Predicted Secondary structure 




........


...
Query SS confidence 






















. . . . . .














. .




.








. .
















Query Sequence  LLSVIPFFLATILFEKTNRFFLF. . . . . . APLFVSMVFGVAFLY. . LTGIP. YKTYKIGGD. . IIYFFLEPATICFAIPL
Query Conservation   


  
     
  
     
 ...... 
 
 
   

  
 ..   
 .
  
  
  .. 
  












Alig confidence 






















......














..




.








..
















Template Conservation 
  

  
       

   
 
      
  
   
   
 
 
 
 


 
  

   

    
             
Template Sequence  LSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGL
Template Known Secondary structure  TTS
SS

TTTS
GGG
STTTT




T
Template Predicted Secondary structure 




















Template SS confidence 















































































   901........910.........920.........930.........940.........950.........960.........970.........980
 
   84.....90......
Predicted Secondary structure 
Query SS confidence 












Query Sequence  YKKREVLVKHWHR
Query Conservation 
 
   
      
Alig confidence 












Template Conservation   

 
   

   
Template Sequence  DEILKFIARNYLE
Template Known Secondary structure  TTT
Template Predicted Secondary structure 


Template SS confidence 












   981........990...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions