Job Description P60643 Confidence 1.99% Date Tue Jul 17 17:05:12 BST 2012 Rank 43 Aligned Residues 155 % Identity 8% Template c4dblB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:vitamin b12 import system permease protein btuc; PDBTitle: crystal structure of e159q mutant of btucdf Resolution 3.49 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	F	F	L	A	T	I	L	F	E	K	T	N	R	F	F	L	F	A	P	L	F	V	S	M	V	F	G	V	A	F	L	Y	L	T	G	I	P	Y	K	T	Y	K	I	G	G	D	I	I	Y	F	F	L	E	P	A	T	I	C	F	A	I	P	L	Y	K	K	R	E	V	L	V	K	H	W	H	R	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	A	I	S	G	A	V	M	Q	A	L	F	E	N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	S	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L
Template Known Secondary structure															T	T		T	T			T	T	T	T	T																	T	T		S																									T	T				S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		G	G	I	G	I	G	T	V	V	A	L	L	I	I	L	T	F	A	K	L	A	Q	F	A	N	D	V	I	L	S	M	L	P	Q	A	A	T	T	A	I	A	L	P	V	S	A	G	I	G	G	I	K	.	.	E	L	T	S	L	A	V	I	L	N	G	V	I	I	Y	A	L	G	N	K	F	L	K	L	F	R
Query Conservation																																																						.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	V	A	L	G	I	I	S	S	A	L	M	T	W	A	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	F	S	T	S	V	D	L	R	Q	L	M	Y	W	M	M	G	G	F	G	G	V	D	W	R	Q	S	W	L	M	L	A	L	I	P	V	L	L	W	I	S	S	Q	S	R	P	M	N	M	L	A
Template Known Secondary structure																			T	.	.	.	.	.	.	.	.	.	.	.	.	T																	S	S	S		S	G	G	G															T	T									T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		177	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	N	P	I	A	R	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	E	I	S	A	R	Q	L
Template Known Secondary structure		T								T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions