 |
| Job Description | P60643 | | Confidence | 1.77% | Date | Tue Jul 17 17:05:12 BST 2012 |
| Rank | 59 | Aligned Residues | 26 |
| % Identity | 23% | Template | c3qrqA_ |
| PDB info |
PDB header:rna binding protein/rna | Chain: A: PDB Molecule:putative uncharacterized protein tthb192; |
PDBTitle: structure of thermus thermophilus cse3 bound to an rna representing a2 pre-cleavage complex
|
| Resolution | 3.19 Å |
|
|   |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | R | I | T | N | P | I | A | R | G | L | A | L | G | T | S | G | H | T | L | G | V | A | P | A | K | E | L | G |
| Query Conservation |   |
  |   |
|   |   |   |   |
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|
|
|   |   |
|   |   |
|
| . | . | . |   |   |
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
L | E | V | V | D | P | E | R | A | L | A | T | L | . |
. |
. |
R | R | G | V | G | P | G | K | A | L | G | L | G |
| Template Known Secondary structure |   |
 |  |  | S |
|  |  |  |  |  |  |  |  | . | . | . |  |  |
| S | S | S |
| G | G | G | T |
|
|
| Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|