Job Description P60643 Confidence 16.83% Date Tue Jul 17 17:05:12 BST 2012 Rank 5 Aligned Residues 92 % Identity 15% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		G	D	I	I	Y	F	F	L	E	P	A	T	I	C	F	A	I	P	L	Y	K	K	R	E	V	L	V	K	H	W	H	R	I	I	G	G	I	G	I	G	T	V	V	A	L	L	I	I	L	T	F	A	K	L	A	.	Q	F	A	N	D	V	I	L	S	M	L	P	Q	A	A	T	T	A	I	A	L	P	V	S
Query Conservation																																																									.
Alig confidence																																																									.																.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	P	F	A	N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																						S	S	S		S																								T	T	T	T	T																			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	G	G	I	K	E	L	T	S	L	A	V	I	L	N	G	V	I	I	Y	A	L	G	N	K	F	L	K	L	F	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	I	K	G	I	V	I	S	I	V	F	I	L	L	Y	R	R	L	A	N	F	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																T	T					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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