Job Description P60643 Confidence 1.97% Date Tue Jul 17 17:05:12 BST 2012 Rank 44 Aligned Residues 94 % Identity 13% Template c2f2bA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin aqpm; PDBTitle: crystal structure of integral membrane protein aquaporin aqpm at 1.68a2 resolution Resolution 1.68 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	S	V	I	P	F	F	L	A	T	I	L	F	E	K	T	N	R	F	F	L	F	A	P	L	F	V	S	M	V	F	G	V	A	F	L	Y	L	T	G	I	P	Y	K	T	Y	K	I	G	G	D	I	I	Y	F	F	L	E	P	A	T	I	C	F	A	I	P	L	Y	K	K	R	E	V	L	V	K	H
Query Conservation
Alig confidence																																																								.	.	.	.	.											.	.	.
Template Conservation																																																								.	.	.	.	.											.	.	.
Template Sequence		V	V	G	T	F	L	L	M	I	T	I	M	G	I	A	V	D	E	R	A	P	K	G	F	A	G	I	I	I	G	L	T	V	A	G	I	I	T	T	L	G	N	I	S	G	S	S	L	N	P	A	R	T	F	.	.	.	.	.	G	P	Y	L	N	D	M	I	F	A	.	.	.	G	T	D	L	W	N	Y	Y
Template Known Secondary structure																T	T	S	T	T	S		T	T																																.	.	.	.	.											.	.	.					G	G	G	T
Template Predicted Secondary structure																																																								.	.	.	.	.											.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	R	I	I	G	G	I	G	I	G	T	V	V	A	L	L	I	I	L	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	Y	V	I	G	P	I	V	G	A	V	L	A	A	L	T	Y	Q	Y	L	T
Template Known Secondary structure		T																					T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions