Return to main results Retrieve Phyre Job Id

Job DescriptionO52582
Confidence99.68%DateTue Jul 17 17:05:03 BST 2012
Rank130Aligned Residues296
% Identity11%Templated1seza1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.....
Predicted Secondary structure 















......













Query SS confidence 







































. . . . . .

































Query Sequence  PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA. . . . . . NCALPYVIGEVVEDRRYALAYTPEKFYDRKQITV
Query Conservation 








 


 

  
     
  
 


     
  ......   
                           
  
Alig confidence 





















..















......

































Template Conservation 


 




 


 

  

  ..
  
 



    

   
          
                          
Template Sequence  KRVAVIGAGVSGLAAAYKLKIH. . GLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTXTESEGDVTFLIDSLGLREKQQF
Template Known Secondary structure 


STT..S

SSSSS
SS

TTSS


B


STT
GGG
Template Predicted Secondary structure 




..
























Template SS confidence 















































































   14.....20.........30..... ....40.........50.........60.........70.........80.........90.
 
   76...80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure 










































.......
Query SS confidence 








































































. . . . . . .
Query Sequence  KTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQV. . . . . . .
Query Conservation       
  

                            
                                  .......
Alig confidence 








































































.......
Template Conservation                                                                                  
Template Sequence  PLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQXLLEPILWSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDP
Template Known Secondary structure 
SS



SSSS

SSSSSS
T



B
TTS

G
Template Predicted Secondary structure 




































Template SS confidence 















































































   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   149150.........160.........170.........180.........190.........200.........210.........
Predicted Secondary structure  .........




























Query SS confidence  . . . . . . . . .






































































Query Sequence  . . . . . . . . . DKVLVVGAGYVSLEVLENLNERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE
Query Conservation  .........  
   
 
                                             

 
     
  
    
Alig confidence  .........






































































Template Conservation                                                                          
       
Template Sequence  DSLSXHHSFPELWNLEKRFGSVILGAIRSKLSKTSANKKRQRGSFSFLGGXQTLTDAICKDLREDELRLNSRVLELSCSC
Template Known Secondary structure  GGSB
TS
TT



S

STT
S
BTT
TTTS
TTTTT


Template Predicted Secondary structure 



























Template SS confidence 















































































   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   220.........230.... .....240.........250.........260.........270..
Predicted Secondary structure  ...............



............




















Query SS confidence  . . . . . . . . . . . . . . .














. . . . . . . . . . . .





































Query Sequence  . . . . . . . . . . . . . . . ITFKSGKVEHYDMII. . . . . . . . . . . . EGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNI
Query Conservation  ...............     
     
 

............   
  
   
           
 
 

    
  
 
Alig confidence  ...............














............





































Template Conservation                                                                            
 



Template Sequence  TEDSAIDSWSIISASPHKRQSEEESFDAVIXTAPLCDVKSXKIAKRGNPFLLNFIPEVYGHNYDSVLDAIDKXEKNLPGL
Template Known Secondary structure  SSSSSS
B
SSSS
B


S
S
TSSSSSB


TTS




TTSTT
Template Predicted Secondary structure 













































Template SS confidence 















































































   272.......280.........290.........300.........310.........320.........330.........340.........350.
 
   273......280.........290.........300.........310
Predicted Secondary structure 












Query SS confidence 





































Query Sequence  YAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA
Query Conservation 

 

 
       
      
   
   
  

 

 
Alig confidence 







...........


















Template Conservation 
 


  
...........
  
  
  

  

    
Template Sequence  FYAGNHRG. . . . . . . . . . . GLSVGKALSSGCNAADLVI
Template Known Secondary structure 

SSSS...........
SS
Template Predicted Secondary structure 




...........

Template SS confidence 





































   464.....470. ........480.........490
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions