Job Description O52582 Confidence 99.48% Date Tue Jul 17 17:05:03 BST 2012 Rank 144 Aligned Residues 288 % Identity 12% Template d1jnra2 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain Resolution 1.60

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																							.	.																					.	.	.	.	.
Query SS confidence																							.	.																					.	.	.	.	.
Query Sequence		I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	.	.	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	F	A	N	C	A	.	.	.	.	.	L	P	Y	V	I	G	E	V	V	E	D	R	R	Y	A	L	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K
Query Conservation																							.	.																					.	.	.	.	.
Alig confidence																							.	.																					.	.	.	.	.
Template Conservation
Template Sequence		I	L	I	I	G	G	G	F	S	G	C	G	A	A	Y	E	A	A	Y	W	A	K	L	G	G	L	K	V	T	L	V	E	K	A	A	V	E	R	S	G	A	V	A	Q	G	L	S	A	I	N	T	Y	I	D	L	T	G	R	S	E	R	Q	N	T	L	E	D	Y	V	R	Y	V	T	L	D	M	M	G	L	A
Template Known Secondary structure								S															T	T	T	T								S	S		T	T	T		S	T	T	T	T						S					S	S	S	S	B	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I	D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	D	L	V	A	D	Y	A	R	H	V	D	G	T	V	H	L	F	E	K	W	G	L	P	I	W	K	T	P	D	G	K	Y	V	R	E	G	Q	W	Q	I	M	I	H	G	E	S	Y	K	P	I	I	A	E	A	A	K	M	A	V	G	E	E	N	I	Y	E	R	V	F	I	F	E	L	L	K	D	N	N
Template Known Secondary structure																							T	T			B		B		T	T	S		B		B	S	S	S	S							T	T															G	G	G				S										T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	V	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	D	A	D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E	I	T	F	K	S	G	K	V	E	H	Y	D	M	I	I	E	G
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		D	P	N	A	V	A	G	A	V	G	F	S	V	R	E	P	K	F	Y	V	F	K	A	K	A	V	I	L	A	T	G	G	A	T	L	L	F	R	P	R	S	T	G	E	A	A	G	R	T	W	Y	A	.	.	.	.	.	.	.	.	I	F	D	T	G	S	G	Y	Y	M	G	L	K	A	G	A	M	L	T	Q
Template Known Secondary structure			T	T	B									S	S	S	S								S									B		S	S	S			S			S	G	G	G	G			S	S		.	.	.	.	.	.	.	.	T	T		B	S										T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	H	P	N	S	K	F	I	E	S	S	N	I	K	L	D	R	K	G	F	I	P	V	N	D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A
Query Conservation
Alig confidence								.	.	.																																								.	.	.	.	.	.	.	.
Template Conservation								.	.	.																																								.	.	.	.	.	.	.	.
Template Sequence		A	G	F	W	V	C	.	.	.	G	P	E	D	L	M	P	E	E	Y	A	K	L	F	P	L	K	Y	N	R	M	T	T	V	K	G	L	F	A	I	G	D	C	A	G	A	N	P	H	.	.	.	.	.	.	.	.	K	F	S	S	G	S	F	T	E	G	R	I	A	A	K	A	A	V
Template Known Secondary structure								.	.	.			T	T	T							T	T		S	S			T	T	B		S	S	B	T					G	G	G	B		S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.																																								.	.	.	.	.	.	.	.
Template SS confidence
		402	.	.	.	.	.				.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.									.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions