16 c4dnaA_ Probab=100.00  E-value=0  Score=402.80  Aligned_columns=400  Identities=17%

Q ss_pred             CC-EEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC--CCCCCHH------------------------------
Q ss_conf             97-19998798989999999997189977999947888887--7544101------------------------------
Q batch____         1 MP-KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF--ANCALPY------------------------------   47 (438)
Q Consensus         1 Mk-kVvIIGaG~AGl~aA~~L~~~~~g~~V~iie~~~~~g~--~~~~i~~------------------------------   47 (438)
                      |. .|||||||+||++||.+|++.  |++|+|||+++++|+  ...|+|.                              
T Consensus         2 ~dYDVvIIGaG~AGl~aA~~La~~--G~~V~iiEk~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (461)
T c4dnaA_           2 FDYDLFVIGGGSGGVRSGRLAAAL--GKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW   79 (461)
T ss_dssp             CSEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCEEEECCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf             765589998989899999999988--982999977776870123124653000000246687874001674467655799


Q ss_pred             -HHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             -1036457727899874999999769879958889998626766885201134430243000002455655565433212
Q batch____        48 -VIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDI  126 (438)
Q Consensus        48 -~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  126 (438)
                       .+..........+...........++.............       ..........+.........+.....+....  
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--  150 (461)
T c4dnaA_          80 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPN-------TVKLLASGKTVTAERIVIAVGGHPSPHDALP--  150 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSS-------EEEETTTTEEEEEEEEEECCCEEECCCTTST--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCC-------CEEEECCCEEEEEEEECCCCCCCCCCCCCCC--
T ss_conf             9999999999985313444333314812310000111366-------1488138829987521022576323457888--


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEE
Q ss_conf             33333467788866642103685475405532111014666524760244113333345542045899998642278489
Q batch____       127 TFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLNERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPY  206 (438)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i  206 (438)
                          .................++.+.+.+.+....+.........................+......+...+++.|+++
T Consensus       151 ----~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~i  226 (461)
T c4dnaA_         151 ----GHELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDXRRGLHAAXEEKGIRI  226 (461)
T ss_dssp             ----TGGGCBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEE
T ss_pred             ----CCCEEEECHHHHHHHHHHHHCEECCCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             ----8305886134522345022100203310301013667763012220001121234453146899999998679789


Q ss_pred             EECCEEEEEECCC-----EEEECCEEEECCEEEEEEEEEECCHH--HHHCCCCCCCCCEEEECCCCCCCCCCEEEEEECC
Q ss_conf             6388799998683-----15503124532567984324307244--5521861146973898753433479889952004
Q batch____       207 RLNEEINAINGNE-----ITFKSGKVEHYDMIIEGVGTHPNSKF--IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIA  279 (438)
Q Consensus       207 ~~~~~V~~i~~~~-----~~~~~g~~~~~d~vi~~~g~~p~~~l--~~~~~~~~~~~g~i~vd~~~~t~~p~IyA~GD~a  279 (438)
                      +++++|++++.++     +.+.++..+.+|.+++++|+.||+++  ....++.++++|+|.||+++||++|||||+|||+
T Consensus       227 ~~~~~V~~i~~~~~~~~~~~~~~~~~i~~d~Vi~a~G~~Pn~~~~~~~~~~i~~~~~G~I~Vd~~~~ts~p~IyA~GD~~  306 (461)
T c4dnaA_         227 LCEDIIQSVSADADGRRVATTXKHGEIVADQVXLALGRXPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVT  306 (461)
T ss_dssp             ECSCCEEEEEECTTSCEEEEESSSCEEEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEECSGGG
T ss_pred             EECCEEEEEEECCCEEEEEEECCCEEECCCEEEEEEEECCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCEEEEEECC
T ss_conf             73888999981598689999222113205638995311558531212267823679884836667617835879972145


Q ss_pred             CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHCCCCEEEEECCCCC
Q ss_conf             67677668821122101789999999998728997012784632799993833599746889997569838999616772
Q batch____       280 TSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHA  359 (438)
Q Consensus       280 ~~~~~~~g~~~~~~l~~~A~~~g~~aa~ni~g~~~~~~~~~~~~~~~~~~~p~~a~vG~~~~~a~~~~~~~~~~~~~~~~  359 (438)
                      +.          ++++++|.+||++||+||++..... .+...++.++|++|++|+||+||++|++.++++.+...++..
T Consensus       307 ~~----------~~~~~~A~~qg~~aa~ni~~~~~~~-~~~~~~~~~~~~~~~~a~vG~t~~~a~~~~~~~~~~~~~~~~  375 (461)
T c4dnaA_         307 DR----------VQLTPVAIHEAXCFIETEYKNNPTS-PDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRP  375 (461)
T ss_dssp             SS----------CCCHHHHHHHHHHHHHHHHSSCCCC-CCCSCCCEEECSSSCEEEEECCHHHHHHHSSEEEEEEEEECC
T ss_pred             CC----------CCHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCEEEECCCCEEEEECCHHHHHHCCCCEEEEEEECCC
T ss_conf             88----------6227999999999999870799846-787767378963764688746889999679977999996575


Q ss_pred             CC---CCCCCCEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHH
Q ss_conf             00---4799716999999788985999999805988999999999998699788996196025889743233
Q batch____       360 NY---YPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKD  428 (438)
Q Consensus       360 ~~---~~~~~~g~~klv~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~  428 (438)
                      ..   ..+++.||+||++|++|+||||+|++|++ |+|+||.+++||++++|++||.+++|+ |||+||+++
T Consensus       376 ~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~-a~~~i~~~~~ai~~~~t~~~l~~~~~~-~P~~~e~~~  445 (461)
T c4dnaA_         376 XKATLSGRKEKTIXKLVVNAADRKVVGAHILGHD-AGEXAQLLGISLRAGCTKDDFDRTXAV-HPTAAEELV  445 (461)
T ss_dssp             TTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTT-HHHHHHHHHHHHHTTCBHHHHHTSCCC-TTCSGGGGT
T ss_pred             CCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHCCCCHHHHHHCCCC-CCCHHHHHH
T ss_conf             5333347888518999995799859999998198-546899999999758988899717878-887668999


