Phyre 2 alignment of O52582 with c4a9wB

Job Description O52582
Confidence 99.93% Date Tue Jul 17 17:05:03 BST 2012

Rank 81 Aligned Residues 297

% Identity 13% Template c4a9wB_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:monooxygenase; PDBTitle: flavin-containing monooxygenase from stenotrophomonas maltophilia

Resolution 2.72 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	M	P	K	.	.	I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	F	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	L	P	Y	V	I	G	E	V	V	E	D	R	R	Y	A	L
Query Conservation				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence	M	D	S	V	D	V	V	V	I	G	G	G	Q	S	G	L	S	A	G	Y	F	L	R	R	S	.	.	G	L	S	Y	V	I	L	D	A	E	A	S	P	G	G	A	W	Q	H	A	W	H	S	L	H	L	F	S	P	A	G	W	S	S	I	P	G	W	P	M	P	A	S	Q	G	P	Y	P	A	R	A	E	V
Template Known Secondary structure												S													S	.	.	S									S	S	S	S	S	G	G	G	G	G	S		T	T		B		S	S		G	G	G	S			S	S	S						S	S	S	S		B
Template Predicted Secondary structure																										.	.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

	61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K	T	Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I	D
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence	L	A	Y	L	A	Q	Y	E	Q	K	Y	A	L	P	V	L	R	P	I	R	V	Q	R	V	S	H	F	G	E	R	L	R	.	.	.	V	V	A	R	D	G	R	Q	W	L	A	R	A	V	I	S	A	T	G	T	W	G	E	A	Y	T	P	E	Y	Q	G	L	E	S	F	A	G	I	Q	L	H	S	A	H	Y
Template Known Secondary structure											T	T						S										T	T				.	.	.				T	T	S														S	T	T	S	B						T	T	G	G	G			S					G	G	G
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

	141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G	Y	V	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	.	K	L	M	D	A	D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence	S	T	P	A	P	F	A	G	M	R	V	A	I	I	G	G	G	N	S	G	A	Q	I	L	A	E	V	S	T	V	A	E	T	T	W	I	T	Q	H	E	P	A	F	L	A	D	D	V	D	G	R	V	L	F	E	R	D	I	V	M	V	P	P	V	L	D	A	R	A	R	G	V	L	A	A	V	P	P	P	A
Template Known Secondary structure			S	G	G	G	T	T									S											T	T	T	S							S	S				B			T	T			T								B												T	T									S
Template Predicted Secondary structure
Template SS confidence
	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure	.	.	.	.	.	.																																														.	.
Query SS confidence	.	.	.	.	.	.																																														.	.
Query Sequence	.	.	.	.	.	.	I	T	F	K	S	G	K	V	E	H	Y	D	M	I	I	E	G	V	G	T	H	P	N	S	K	F	I	E	S	S	N	I	K	L	D	R	K	G	F	I	P	V	N	D	K	.	.	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S
Query Conservation	.	.	.	.	.	.																																														.	.
Alig confidence	.	.	.	.	.	.																																	.													.	.																						.	.	.	.	.	.
Template Conservation																																							.																																				.	.	.	.	.	.
Template Sequence	R	F	S	P	T	G	M	Q	W	A	D	G	T	E	R	A	F	D	A	V	I	W	C	T	G	F	R	P	A	L	S	H	L	K	G	L	D	L	.	V	T	P	Q	G	Q	V	E	V	D	G	S	G	L	R	A	L	A	V	P	S	V	W	L	L	G	Y	G	D	W	N	G	M	A	S	.	.	.	.	.	.
Template Known Secondary structure				S	S					T	T	S						S								B					G	G	G	T	T	T	T		.	B		T	T	S		B		B		T	T	S	S	B	B	S	S		T	T					S	S		G	G	G	S	T	T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																							.																																				.	.	.	.	.	.
Template SS confidence
	258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

	292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A
Query Conservation
Alig confidence	.
Template Conservation	.
Template Sequence	.	A	T	L	I	G	V	T	R	Y	A	R	E	A	V	R	Q	V	T
Template Known Secondary structure	.	T	S
Template Predicted Secondary structure	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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