Job Description O52582 Confidence 99.97% Date Tue Jul 17 17:05:03 BST 2012 Rank 60 Aligned Residues 293 % Identity 17% Template c2zbwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of thioredoxin reductase-like protein from thermus2 thermophilus hb8 Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		K	I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	.	.	.	.	.	F	A	N	C	A	L	P	Y	V	I	G	E	V	V	E	D	R	R	Y	A	L	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K	T
Query Conservation																																							.	.	.	.	.
Alig confidence																							.	.															.	.	.	.	.
Template Conservation																							.	.
Template Sequence		D	V	L	I	V	G	A	G	P	T	G	L	F	A	G	F	Y	V	G	X	R	.	.	G	L	S	F	R	F	V	D	P	L	P	E	P	G	G	Q	L	T	A	L	Y	P	E	K	Y	I	Y	D	V	A	G	F	P	K	V	Y	A	K	D	L	V	K	G	L	V	E	Q	V	A	P	F	N	P	V	Y	S	L
Template Known Secondary structure									S													T	.	.	T								S	S	S	S	S							T		T	T	S					S	T	T		S	S															G	G	G
Template Predicted Secondary structure																							.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I	D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G
Query Conservation
Alig confidence																																																																					.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		G	E	R	A	E	T	L	E	R	E	G	D	L	F	K	V	T	T	S	Q	G	N	A	Y	T	A	K	A	V	I	I	A	A	G	V	G	A	F	E	P	R	R	I	G	A	P	G	E	R	E	F	E	G	R	G	V	Y	Y	A	V	K	S	K	A	E	F	Q	.	.	.	G	K	R	V	L	I	V	G	G	G
Template Known Secondary structure		S										T	T							T	T	S													T	T	S										T	T	T	T	T	T	B	T	T	T			S	S		S		G	G	G	G	T	.	.	.	T								S	S
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	D	A	D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E	I	T	F	.	.	.	.	.	.	.	.	.	K	S	G	K	V	E
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence																														.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation																														.	.
Template Sequence		D	S	A	V	D	W	A	L	N	L	L	D	T	A	R	R	I	T	L	I	H	R	R	P	Q	F	R	A	.	.	H	E	A	S	V	K	E	L	X	K	A	H	E	E	G	R	L	E	V	L	T	P	Y	E	L	R	R	V	E	G	D	E	R	V	R	W	A	V	V	F	H	N	Q	T	Q	E	E	L	A	L
Template Known Secondary structure											T	T	T	T	S	S							S	S	S	S			S	.	.														T	T	S	S				T	T									S	S	S									T	T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	D	M	I	I	E	G	V	G	T	H	P	N	S	K	F	I	E	S	S	N	I	K	L	D	R	K	G	F	I	P	V	N	D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q
Query Conservation
Alig confidence																											.																																.	.	.	.	.	.	.
Template Conservation																											.																																.	.	.	.	.	.	.
Template Sequence		E	V	D	A	V	L	I	L	A	G	Y	I	T	K	L	G	P	L	A	N	W	G	L	A	L	.	E	K	N	K	I	K	V	D	T	T	X	A	T	S	I	P	G	V	Y	A	C	G	D	I	V	T	Y	P	G	K	L	.	.	.	.	.	.	.	P	L	I	V	L	G	F	G	E	A	A	I	A	A	N	H
Template Known Secondary structure				S													G	G	G	G	G	S					.		T	T						T	T		B		S	S	T	T					S	T	T				T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																																.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		309	310
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		312	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions