Job Description O52582 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 12 Aligned Residues 400 % Identity 17% Template c2v6oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin glutathione reductase; PDBTitle: structure of schistosoma mansoni thioredoxin-glutathione2 reductase (smtgr) Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.				.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.					.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.					.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	.	.	.	.	.	.	.	.	M	S	F	A	.	.	.	N	C	A	L	P	Y	V	I	G	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.					.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.													.	.	.	.	.	.	.	.					.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		D	L	I	V	I	G	G	G	S	G	G	L	A	A	G	K	E	A	A	K	Y	.	.	G	A	K	T	A	V	L	D	Y	V	E	P	T	P	I	G	T	T	W	G	L	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	G	L	L	S	H	A	L	E	D	A	E	H	F	G	W	S	L	D
Template Known Secondary structure									S													T	.	.	T													T	T						T	T							S																							T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
					53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	V	E	D	R	R	Y	A	L	A	Y	T	P	E	K	F	Y	D	.	.	.	.	.	.	.	.	.	.	.	R	K	Q	I	T	V	K	T	Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N
Query Conservation		.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.										.														.	.	.
Template Conservation																																										.														.	.	.
Template Sequence		R	S	K	I	S	H	N	W	S	T	M	V	E	G	V	Q	S	H	I	G	S	L	N	W	G	Y	K	V	A	L	R	D	N	Q	V	T	Y	L	N	A	.	K	G	R	L	I	S	P	H	E	V	Q	I	T	.	.	.	D	K	N	Q	K	V	S	T	I	T	G	N	K	I	I	L	A	T	G	E	R	P	K
Template Known Secondary structure			T	T																														T	T						S	.					S	S	S	S						.	.	.		T	T
Template Predicted Secondary structure																																										.														.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I	D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G	Y	V	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	D	A	D	M	N	Q	P	I	L	D	E
Query Conservation
Alig confidence														.	.	.	.	.	.																																												.
Template Conservation														.	.	.	.	.	.																																												.
Template Sequence		Y	P	E	I	P	G	A	V	E	Y	G	I	.	.	.	.	.	.	T	S	D	D	L	F	S	L	P	Y	F	P	G	K	T	L	V	I	G	A	S	Y	V	A	L	E	C	A	G	F	L	A	S	L	G	G	D	V	T	V	M	V	R	.	S	I	L	L	R	G	F	D	Q	Q	M	A	E	K	V	G	D	Y
Template Known Secondary structure				S	S	T	T						B	.	.	.	.	.	.						T	T		S	S				S							S													T	T								S	.	S		S	S	T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.																																												.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E	I	T	F	K	S	G	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	Y	D	M	I	I	E	G	V	G	T	H	P	N	S	K	F	.	.	I	E	S	S	N	I	K	L	D	R	K	G	F	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		M	E	N	H	G	V	K	F	A	K	L	C	V	P	D	E	I	K	Q	L	K	V	V	D	T	E	N	N	K	P	G	L	L	L	V	K	G	H	Y	T	D	G	K	K	F	E	E	E	F	E	T	V	I	F	A	V	G	R	E	P	Q	L	S	K	V	L	C	E	T	V	G	V	K	L	D	K	N	G	R	V
Template Known Secondary structure				T	T	T					T	T													B	T	T	T	T	B											T	T	S								S						S						T	T	T	T	B		T	T	S				B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	N	D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A	G	N	D	T	I	E	F	K	G	F	L	G	N	N	I	V	K	F	F	D	Y	T	F	A	S	V	G	V	K
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.																																					.
Template Conservation																								.	.	.	.	.	.	.	.	.																																					.
Template Sequence		V	C	T	D	D	E	Q	T	T	V	S	N	V	Y	A	I	G	D	I	N	A	G	.	.	.	.	.	.	.	.	.	K	P	Q	L	T	P	V	A	I	Q	A	G	R	Y	L	A	R	R	L	F	A	G	A	T	E	L	T	D	Y	S	N	V	A	T	T	V	.	F	T	P	L	E	Y	G	A	C	G	L	S
Template Known Secondary structure					T	T		B		S	S	T	T					G	G	G	B	T	T	.	.	.	.	.	.	.	.	.	S																				S									T	T						.		S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.										.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360							.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																							.	.	.	.	.	.																	.
Query SS confidence																							.	.	.	.	.	.																	.
Query Sequence		P	N	E	L	K	Q	F	D	Y	K	M	V	E	V	T	Q	G	A	H	A	N	.	.	.	.	.	.	Y	Y	P	G	N	S	P	L	H	L	R	V	Y	Y	D	T	.	S	N	R	Q	I	L	R	A	A	A	V	G	K	E	G	A	D	K	R	I	D	V	L	S	M	A	M	M	N	Q	L	T	V	D	E	L
Query Conservation																							.	.	.	.	.	.																	.
Alig confidence																							.	.	.	.	.	.																	.															.
Template Conservation																																																												.
Template Sequence		E	E	D	A	I	E	K	Y	G	D	K	D	I	E	V	Y	H	S	N	F	K	P	L	E	W	T	V	A	H	R	E	D	N	V	C	Y	M	K	L	V	C	R	K	S	D	N	M	R	V	L	G	L	H	V	L	G	P	N	.	A	G	E	I	T	Q	G	Y	A	V	A	I	K	M	G	A	T	K	A	D	F
Template Known Secondary structure											G	G	G																T	T			S	S										T	T	T	T	T									S	T	T	.														T			B
Template Predicted Secondary structure																																																												.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	F	E	V	A	Y	A	P	P	Y	S	H	P	K
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		D	R	T	I	G	I	.	H	P	T	C	S	E	T	F
Template Known Secondary structure				S				.	T	T		S	G	G	G	G
Template Predicted Secondary structure								.
Template SS confidence
		565	.	.	.	.	570		.	.	.	.	.	.	.	.