Job Description O52582 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 50 Aligned Residues 367 % Identity 16% Template c2v3aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin reductase; PDBTitle: crystal structure of rubredoxin reductase from pseudomonas2 aeruginosa. Resolution 2.4 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	F	A	N	C	A	L	P	Y	V	I	G	E	V	V	E	D	R	R	Y	A	L	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K	T	Y	H	E	V
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		A	P	L	V	I	I	G	T	G	L	A	G	Y	N	L	A	R	E	W	R	K	L	D	G	E	T	P	L	L	M	I	T	A	D	D	G	R	S	Y	S	K	P	M	L	S	T	G	F	S	K	.	N	K	D	A	D	G	L	A	M	A	E	P	G	A	M	A	E	Q	L	N	A	R	I	L	T	H	T	R	V
Template Known Secondary structure										S												T	T		S	S	S							S	S							G	G	G	G	G	G	T	T	T	T	.	T																		T	T						S
Template Predicted Secondary structure																																																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I	D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G	Y	V	S	L
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		T	G	I	D	P	G	H	Q	R	I	W	I	G	E	E	E	V	R	Y	R	D	L	V	L	A	W	G	A	E	P	I	R	V	P	V	E	G	D	A	Q	D	A	L	Y	P	I	N	D	L	E	D	Y	A	R	F	R	Q	A	A	A	G	.	.	.	.	.	K	R	R	V	L	L	L	G	A	G	L	I	G	C
Template Known Secondary structure						G	G	G	T					T	T						S																B	S	T	T	T	T						S	S												T	T	.	.	.	.	.										S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																												.																																	.	.	.	.
Query SS confidence																												.																																	.	.	.	.
Query Sequence		E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	.	D	A	D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E	.	.	.	.	I	T	F	K	S	G	K	V	E	H	Y	D	M	I	I	E	G
Query Conservation																												.																																	.	.	.	.
Alig confidence																												.																																	.	.	.	.
Template Conservation
Template Sequence		E	F	A	N	D	L	S	S	G	G	Y	Q	L	D	V	V	A	P	C	E	Q	V	M	P	G	L	L	H	P	A	A	A	K	A	V	Q	A	G	L	E	G	L	G	V	R	F	H	L	G	P	V	L	A	S	L	K	K	A	G	E	G	L	E	A	H	L	S	D	G	E	V	I	P	C	D	L	V	V	S	A
Template Known Secondary structure										T	T								S	S	S	S	S	S	T	T	T	S														T	T	T						S										T	T							T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	H	P	N	S	K	F	I	E	S	S	N	I	K	L	D	R	K	G	F	I	P	V	N	D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A	G	N	D	T	I	E
Query Conservation
Alig confidence																				.	.																														.	.	.	.	.	.																								.
Template Conservation																				.	.																														.	.	.	.	.	.																								.
Template Sequence		V	G	L	R	P	R	T	E	L	A	F	A	A	G	L	A	V	N	.	.	R	G	I	V	V	D	R	S	L	R	T	S	H	A	N	I	Y	A	L	G	D	C	A	E	V	D	G	L	N	.	.	.	.	.	.	L	L	Y	V	M	P	L	M	A	C	A	R	A	L	A	Q	T	L	A	G	N	P	S	.	Q
Template Known Secondary structure		S												T	T			B	S	.	.	S	S					T	T		B		S	S	T	T					G	G	G				T	T	B		.	.	.	.	.	.			S																T	T				.
Template Predicted Secondary structure																				.	.																														.	.	.	.	.	.																								.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	G	F	L	G	N	N	I	V	K	F	F	D	Y	T	F	A	S	V	G	V	K	P	N	E	L	K	Q	F	D	Y	K	M	V	E	V	T	Q	G	A	H	A	N	Y	Y	P	G	N	S	P	L	H	L	R	V	Y	Y	D	T	S	N	R	Q	I	L	R	A	A	A	V	G	K	E	G	A	D	K	R	I
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Sequence		V	A	Y	G	P	M	P	V	T	V	K	T	P	A	C	P	L	V	V	S	P	P	P	R	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	Q	W	L	V	E	G	S	G	T	D	L	K	V	L	C	R	D	T	A	G	R	V	I	G	Y	A	L	T	G	A	A	.	V	N	E	K	L
Template Known Secondary structure														T	T	S									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T									T	T	S									G	G	G	.	G	G	G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.																.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.
		397	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		374	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions