Job Description O52582 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 36 Aligned Residues 419 % Identity 17% Template c2nvkX_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of thioredoxin reductase from drosophila2 melanogaster Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																																		.	.	50
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	F	A	N	C	A	L	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	G
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		L	I	V	I	G	G	G	S	A	G	L	A	C	A	K	E	A	V	L	N	.	.	G	A	R	V	A	C	L	D	F	V	K	P	T	P	T	L	G	T	K	W	G	V	G	G	T	C	V	N	V	G	C	I	P	K	K	L	M	H	Q	A	S	L	L	G	E	A	V	H	E	A	A	A	Y	G	W	N	V	D
Template Known Secondary structure								S													T	.	.	T													T	T	T						S	S							S																					G	G	G	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	E	D	R	R	Y	A	L	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K	T	Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	I	K	P	D	W	H	K	L	V	Q	S	V	Q	N	H	I	K	S	V	N	W	V	T	R	V	D	L	R	D	K	K	V	E	Y	I	N	G	L	G	S	F	V	D	S	H	T	L	L	A	K	L	K	S	G	E	R	T	I	T	A	Q	T	F	V	I	A	V	G	G	R	P	R	Y	P	D	I	P	G
Template Known Secondary structure		S																															T	T													T	T							T	T	S							S														S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	L	E	D	T	D	A	I	D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G	Y	V	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	D	A	D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		A	V	E	Y	G	I	T	S	D	D	L	F	S	L	D	R	E	P	G	K	T	L	V	V	G	A	G	Y	I	G	L	E	C	A	G	F	L	K	G	L	G	Y	E	P	T	V	M	V	R	S	I	V	.	L	R	G	F	D	Q	Q	M	A	E	L	V	A	A	S	M	E	E	R	G	I	P	F	L	R	K	T
Template Known Secondary structure							B						T	T		S	S											S													T	T								S	S		S	.	S	T	T	S															T	T					T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		E	I	N	A	I	N	G	N	E	.	.	.	.	.	.	.	.	.	.	I	T	F	K	S	G	K	V	E	H	Y	D	M	I	I	E	G	V	G	T	H	P	N	S	K	F	I	E	S	S	N	I	K	L	.	D	R	K	G	F	I	P	V	N	D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A
Query Conservation											.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation
Template Sequence		V	P	L	S	V	E	K	Q	D	D	G	K	L	L	V	K	Y	K	N	V	E	T	G	E	E	S	E	D	V	Y	D	T	V	L	W	A	I	G	R	K	G	L	V	D	D	L	N	L	P	N	A	G	V	T	V	Q	K	D	K	I	P	V	D	S	Q	E	A	T	N	V	A	N	I	Y	A	V	G	D	I	I
Template Known Secondary structure										T	T	S									S	S	S									S											T	T	G	G	G		G	G	G	T	T				S	S	S	S	B				T	T	S	B		S	S	T	T					S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		T	S	H	Y	R	H	V	D	L	P	A	S	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A	G	N	D	T	I	E	F	K	G	F	L	G	N	N	I	V	K	F	F	D	Y	T	F	A	S	V	G	V	K	P	N	E	L	K	Q	F	D	Y	K	M	V	E	V	T	Q	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																										.																																							.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																										.
Template Sequence		Y	G	K	.	.	.	.	.	.	.	.	.	P	E	L	T	P	V	A	V	L	A	G	R	L	L	A	R	R	L	Y	G	G	S	T	Q	R	.	M	D	Y	K	D	V	A	T	T	V	F	T	P	L	E	Y	A	C	V	G	L	S	E	E	D	A	V	K	Q	F	G	A	D	E	I	E	V	F	H	G	Y	Y
Template Known Secondary structure		T	T	S	.	.	.	.	.	.	.	.	.																				S						.				S	S							S	S	S																		G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		329	330	.										.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
				356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure		.	.																								.
Query SS confidence		.	.																								.
Query Sequence		.	.	G	A	H	A	N	Y	Y	P	G	N	S	P	L	H	L	R	V	Y	Y	D	T	S	N	.	R	Q	I	L	R	A	A	A	V	G	K	E	G	A	D	K	R	I	D	V	L	S	M	A	M	M	N	Q	L	T	V	D	E	L	T	E	F	E	V	A	Y	A	P	P	Y	S	H	P	K	D	L	I	N	M
Query Conservation		.	.																								.
Alig confidence		.	.																								.													.																												.
Template Conservation																																								.																												.
Template Sequence		K	P	T	E	F	F	I	P	Q	K	S	V	R	Y	C	Y	L	K	A	V	A	E	R	H	G	D	Q	R	V	Y	G	L	H	Y	I	G	P	V	.	A	G	E	V	I	Q	G	F	A	A	A	L	K	S	G	L	T	I	N	T	L	I	N	T	V	G	I	.	H	P	T	T	A	E	E	F	T	R	L	A	I
Template Known Secondary structure				G	G	G	T	T	T	T				T	T									S	S	T	T		B									T	T	.														T	T		B							S				.	S	S		S	G	G	G	G	G	G
Template Predicted Secondary structure																																								.																												.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.
		433	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Y	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	R	S	G
Template Known Secondary structure		B	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.