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Job DescriptionO52582
Confidence100.00%DateTue Jul 17 17:05:03 BST 2012
Rank33Aligned Residues405
% Identity17%Templatec1zx9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:mercuric reductase; PDBTitle: crystal structure of tn501 mera
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40 .........50.........
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Query Sequence  KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF. . . . . . . . . . . . . . . . . . . . . . . ANCALPYVIGEVVEDRRYA
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Template Sequence  QVAVIGSGGAAMAAALKAVEQ. . GAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSK
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ST..T
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   6...10.........20...... ...30.........40.........50.........60.........70.........80...
 
   60.........70. ........80.........90.........100.........110.........120.......
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Query Sequence  LAYTPEKFYDRK. . . . . . . . . . . . QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDIT
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Template Sequence  LLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVR. . . LNEGGERVVMFDRCLVATGASPAVPPIPGLKE
Template Known Secondary structure  TTT
TTTT...TTSS
S







TTTTT
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   84.....90.........100.........110.........120........ .130.........140.........150.........160
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  FTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLNERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYR
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Template Sequence  SPYWTSTEALASDTI. . . . . PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF. FREDPAIGEAVTAAFRAEGIEVL
Template Known Secondary structure  S

B
T
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S

STT

SSSTT.TTS
TT
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   161........170..... ....180.........190.........200.........210. ........220.........230....
 
   208.210......... 220.........230.........240..... ....250.........260.........270.........280..
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Query Sequence  LNEEINAINGNE. . . ITFKSGKVEHYDMIIEGVGTHPNSKF. . IESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSH
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Template Sequence  EHTQASQVAHMDGEFVLTTTHGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTD. .
Template Known Secondary structure  TT

TTTTS
S


GGGTGGGGT

B
TTS
B


TT
B
SSTT
GGGSS..
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   235....240.........250.........260.........270.........280.........290.........300.........310..
 
   283......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  YRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANY.
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Template Sequence  . . . . . . . . QPQFVYVAAAAGTRAAINMTGGDAA. . LDLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPR
Template Known Secondary structure  ........S


TT



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SSS

TT

GGG
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   313......320.........330....... ..340.........350.........360.........370.........380..
 
   362.......370.........380.........390.........400.........410.........420.........430.....
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Query Sequence  . . YPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGY
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Template Sequence  ALANFDTRGFIKLVIEEGSHRLIGVQAVAPE. AGELIQTAALAIRNRMTVQELADQLFP. YLTMVEG. . . LKLAAQ
Template Known Secondary structure  TT



TTT
BTT.TT
BS


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   383......390.........400.........410... ......420.........430.........440 ....... ..450...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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