Job Description O52582 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 20 Aligned Residues 407 % Identity 18% Template c1tytA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:trypanothione reductase, oxidized form; PDBTitle: crystal and molecular structure of crithidia fasciculata2 trypanothione reductase at 2.6 angstroms resolution Resolution 2.60 Å

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		1	.	.				.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure					.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	K	.	.	.	I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	F	A	N	C	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																						.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		M	S	R	A	Y	D	L	V	V	I	G	A	G	S	G	G	L	E	A	G	W	N	A	A	S	L	H	.	K	K	R	V	A	V	I	D	L	Q	K	H	H	G	P	P	H	Y	A	A	L	G	G	T	C	V	N	V	G	C	V	P	K	K	L	M	V	T	G	A	N	Y	M	D	T	I	R	E	S	A	G	F
Template Known Secondary structure				S	S									S															.									S		S	S	S	B	T	T	T	B			T	T							S																					G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
															46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	V	I	G	E	V	V	E	D	R	R	Y	A	L	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K	T	Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	W	E	L	D	R	E	S	V	R	P	N	W	K	A	L	I	A	A	K	N	K	A	V	S	G	I	N	D	S	Y	E	G	M	F	A	D	T	E	G	L	T	F	H	Q	G	F	G	A	L	Q	D	N	H	T	V	L	V	R	E	S	A	D	P	N	S	A	V	L	E	T	L	D	T	E	Y	I	L	L	A
Template Known Secondary structure		T					G	G	G																													T	S	T	T						S							T	T						S	S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I	D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G	Y	V	.	.	.	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	D	A
Query Conservation																																																	.	.	.
Alig confidence															.	.	.	.	.	.	.																												.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		T	G	S	W	P	Q	H	L	G	I	E	G	D	.	.	.	.	.	.	.	D	L	C	I	T	S	N	E	A	F	Y	L	D	E	A	P	K	R	A	L	C	V	G	G	G	Y	I	S	I	E	F	A	G	I	F	N	A	Y	K	A	R	G	G	Q	V	D	L	A	Y	R	G	D	M	I	L	R	G	F	D	S
Template Known Secondary structure											S	B	T	G	.	.	.	.	.	.	.	G	G		B						T	T		S	S			S							S	S														S		T	T								S	S	S	S	S	S	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																.	.	.	.	.																										.	.
Query SS confidence																																.	.	.	.	.																										.	.
Query Sequence		D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E	.	.	.	.	.	I	T	F	K	S	G	K	V	E	H	Y	D	M	I	I	E	G	V	G	T	H	P	N	S	K	.	.	F	I	E	S	S	N	I	K	L	D	R	K	G	F	I	P	V	N
Query Conservation																																.	.	.	.	.																										.	.
Alig confidence																																.	.	.	.	.																										.	.
Template Conservation
Template Sequence		E	L	R	K	Q	L	T	E	Q	L	R	A	N	G	I	N	V	R	T	H	E	N	P	A	K	V	T	K	N	A	D	G	T	R	H	V	V	F	E	S	G	A	E	A	D	Y	D	V	V	M	L	A	I	G	R	V	P	R	S	Q	T	L	Q	L	D	K	A	G	V	E	V	A	K	N	G	A	I	K	V	D
Template Known Secondary structure														T	T						S										T	T	S							T	T	S						S						S							T	T	S						T			B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S	V	P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A	G	N	D	T	I	E	F	K	G	F	L	G	N	N	I	V	K	F	F	D	Y	T	F	A	S	V	G	V	K	P	N	E
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																					.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		A	Y	S	K	T	N	V	D	N	I	Y	A	I	G	D	V	T	D	R	.	.	.	.	.	.	.	.	.	.	V	M	L	T	P	V	A	I	N	E	G	A	A	F	V	D	T	V	F	A	N	K	P	R	A	T	D	H	T	K	V	A	C	A	V	.	F	S	I	P	P	M	G	V	C	G	Y	V	E	E	D
Template Known Secondary structure		T	T	S	B		S	S	T	T					G	G	G	G		S	.	.	.	.	.	.	.	.	.	.																					S								S	S						.		S	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.											.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	K	Q	F	D	Y	K	M	V	E	V	T	Q	G	A	H	A	N	Y	.	.	.	.	Y	P	G	N	S	P	L	H	L	R	V	Y	Y	D	T	S	N	R	Q	I	L	R	A	A	A	V	G	K	E	G	A	D	K	R	I	D	V	L	S	M	A	M	M	N	Q	L	T	V	D	E	L	T	E	F	E	V	A
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																														.
Template Conservation																																																						.
Template Sequence		A	A	K	K	Y	D	Q	V	A	V	Y	E	S	S	F	T	P	L	M	H	N	I	S	G	S	T	Y	K	K	F	M	V	R	I	V	T	N	H	A	D	G	E	V	L	G	V	H	M	L	G	D	S	.	S	P	E	I	I	Q	S	V	A	I	C	L	K	M	G	A	K	I	S	D	F	Y	N	T	I	G	V
Template Known Secondary structure			T	T	T		S												T						S		T	T											T	T	T		B								S	T	T	.															T		B						T	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		419	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	P	P	Y	S	H	P	K	D
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	H	P	T	S	A	E	E	L	C
Template Known Secondary structure		.	S	S		S	G	G	G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			461	.	.	.	.	.	.	.	.