Job Description O52582 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 32 Aligned Residues 409 % Identity 17% Template c1geuA_ PDB info PDB header:oxidoreductase(flavoenzyme) Chain: A: PDB Molecule:glutathione reductase; PDBTitle: anatomy of an engineered nad-binding site Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	V	V	V	G	A	V	A	G	G	A	T	C	A	S	Q	I	R	R	L	D	K	E	S	D	I	I	I	F	E	K	D	R	D	M	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	C	A	L	P	Y	V	I	G	E	V	V	E	D	R	R	Y	A
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		D	Y	I	A	I	G	G	G	S	G	G	I	A	S	I	N	R	A	A	M	Y	.	.	G	Q	K	C	A	L	I	E	A	K	E	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	H	A	A	Q	I	R	E	A	I	H	M	Y	G	P	D	Y	G	F	D	T	T	I	N	K	F	N	W	E	T
Template Known Secondary structure									S												T	T	.	.	T								S	S		T	T							S																			T	T	T	G	G	G	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Y	T	P	E	K	F	Y	D	R	K	Q	I	T	V	K	T	Y	H	E	V	I	A	I	N	D	E	R	Q	T	V	S	V	L	N	R	K	T	N	E	Q	F	E	E	S	Y	D	K	L	I	L	S	P	G	A	S	A	N	S	L	G	F	E	S	D	I	T	F	T	L	R	N	L	E	D	T	D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	A	S	R	T	A	Y	I	D	R	I	H	T	S	Y	E	N	V	L	G	K	N	N	V	D	V	I	K	G	F	A	R	F	V	D	A	K	T	L	E	V	N	G	E	T	I	T	A	D	H	I	L	I	A	T	G	G	R	P	S	H	P	D	I	P	G	V	E	Y	G	I	D	S	D	G	F	F	A	L
Template Known Secondary structure																								T	T						S							T	T					T	T																					S	T	T	G	G	G	S	B							T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	F	I	K	A	N	Q	V	D	K	V	L	V	V	G	A	G	Y	V	S	L	E	V	L	E	N	L	N	E	R	G	L	H	P	T	L	I	H	R	S	D	K	I	N	K	L	M	D	A	D	M	N	Q	P	I	L	D	E	L	D	K	R	E	I	P	Y	R	L	N	E	E	I	N	A	I	N	G	N	E
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		P	A	L	.	.	.	.	.	P	E	R	V	A	V	V	G	A	G	Y	I	G	V	E	L	G	G	V	I	N	G	L	G	A	K	T	H	L	F	E	M	F	D	A	P	L	P	S	F	D	P	M	I	S	E	T	L	V	E	V	M	N	A	E	G	P	Q	L	H	T	N	A	I	P	K	A	V	V	K	N	T
Template Known Secondary structure		S	S		.	.	.	.	.		S								S													T	T								S	S	S	S	S	S	T	T	S																						S										T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		164	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.																											.	.
Query SS confidence		.	.	.	.	.																											.	.
Query Sequence		.	.	.	.	.	I	T	F	K	S	G	K	V	E	H	Y	D	M	I	I	E	G	V	G	T	H	P	N	S	K	F	.	.	I	E	S	S	N	I	K	L	D	R	K	G	F	I	P	V	N	D	K	F	E	T	N	V	P	N	I	Y	A	I	G	D	I	A	T	S	H	Y	R	H	V	D	L	P	A	S	V
Query Conservation		.	.	.	.	.																											.	.
Alig confidence		.	.	.	.	.																											.	.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	S	L	T	L	E	L	E	D	G	R	S	E	T	V	D	C	L	I	W	A	I	G	R	E	P	A	N	D	N	I	N	L	E	A	A	G	V	K	T	N	E	K	G	Y	I	V	V	D	K	Y	Q	N	T	N	I	E	G	I	Y	A	V	G	D	N	T	G	A	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure		T	S							T	T	S						S						S							S	T	T						T			B		T	T	S		B				T	T	S	B		S	S	T	T					G	G	G	G	T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.											.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.
Predicted Secondary structure																																																											.	.													.	.	.
Query SS confidence																																																											.	.													.	.	.
Query Sequence		P	L	A	W	G	A	H	R	A	A	S	I	V	A	E	Q	I	A	G	N	D	T	I	E	F	K	G	F	L	G	N	N	I	V	K	F	F	D	Y	T	F	A	S	V	G	V	K	P	N	E	L	K	Q	F	D	Y	K	.	.	M	V	E	V	T	Q	G	A	H	A	N	Y	.	.	.	Y	P	G	N	S	P
Query Conservation																																																											.	.													.	.	.
Alig confidence																																																											.	.													.	.	.
Template Conservation
Template Sequence		E	L	T	P	V	A	V	A	A	G	R	R	L	S	E	R	L	F	N	N	K	P	D	E	H	L	D	Y	S	N	I	P	T	V	V	F	S	H	P	P	I	G	T	V	G	L	T	E	P	Q	A	R	E	Q	Y	G	D	D	Q	V	K	V	Y	K	S	S	F	T	A	M	Y	T	A	V	T	T	H	R	Q	P
Template Known Secondary structure																				T	T		T	T						S	S								S	S																		G	G	G															T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	L	R	V	Y	Y	D	T	S	N	R	Q	I	L	R	A	A	A	V	G	K	E	G	A	D	K	R	I	D	V	L	S	M	A	M	M	N	Q	L	T	V	D	E	L	T	E	F	E	V	A	Y	A	P	P	Y	S	H	P	K	D	L	I
Query Conservation
Alig confidence																									.																												.
Template Conservation																									.																												.
Template Sequence		C	R	M	K	L	V	C	V	G	S	E	E	K	I	V	G	I	H	G	I	G	F	G	.	M	D	E	M	L	Q	G	F	A	V	A	L	K	M	G	A	T	K	K	D	F	D	N	T	V	A	I	.	H	P	T	A	A	E	E	F	V	T	M
Template Known Secondary structure										T	T	T	T									S	T	T	.														T	T		B						T	S				.	S	S		S	G	G	G	G	G	T
Template Predicted Secondary structure																									.																												.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.