Job Description P0A0B9 Confidence 70.22% Date Tue Jul 17 17:05:05 BST 2012 Rank 74 Aligned Residues 162 % Identity 16% Template d2vapa1 SCOP info Tubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain Resolution 1.70

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	G	G	K	G	L	N	V	T	R	V	L	A	Q	V	G	E	P	.	V	L	A	S	G	F	I	G	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A	F	Y	N	I	K	G	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	L	E	Q	G	P	E	I	D	N	Q	E
Query Conservation																				.
Alig confidence																				.										.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	G	G	A	G	N	N	T	I	T	R	L	K	M	E	G	I	E	G	A	K	T	V	A	I	N	T	D	.	.	.	.	.	.	A	Q	Q	L	I	R	T	K	A	D	K	K	I	L	I	G	K	K	L	T	.	.	.	.	.	.	.	.	.	.	.	R	G	L	G	A	G	G	N	P	K	I	G	E	E	A
Template Known Secondary structure																	T		T	T								S	B	.	.	.	.	.	.						T	S			S							T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	T	T	B			T	T
Template Predicted Secondary structure																														.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.												.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.												.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V	P	V	I	L	D	C	S	G	A	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	T	V	L	E	N	P	Y	K	P	T	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		A	K	E	S	A	E	E	I	K	A	A	I	Q	D	S	D	M	V	F	I	T	C	G	L	G	G	G	T	G	T	G	S	A	P	V	V	A	E	I	S	K	K	I	G	A	L	T	V	A	V	V	T	L	P	F	V	M	E	G	K	V	R	M	K	N	A	M	E	G	L	E	R	L	K	Q	H	T	D	T	L
Template Known Secondary structure					T									T	T		S								T	T	S	S																T	T												G	G	G																	T	T		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	I	P	N	E	K	L	F	E	I	V	P	N	M	P	L	K	L	A	F	K	V	A	D	E	V	L	I	N	A	V	K
Template Known Secondary structure						G	G	G					S	T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions