 |
| Job Description | P0A0B9 | | Confidence | 69.69% | Date | Tue Jul 17 17:05:05 BST 2012 |
| Rank | 75 | Aligned Residues | 105 |
| % Identity | 19% | Template | d1rq2a1 |
| SCOP info | Tubulin nucleotide-binding domain-like
| Tubulin nucleotide-binding domain-like
| Tubulin, GTPase domain
|
| Resolution | 1.86 |
|
 |
|   |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | G | G | K | G | L | N | V | T | R | V | L | A | Q | V | G | E | P | . |
V | L | A | S | G | F | I | G | G | E | L | G | Q | F | I | A | K | K | L | D | H | A | D | I | K | H | A | F | Y | N | I | K | G | E | T | R | N | C | I | A | I | L | H | E | G | Q | Q | T | E | I | L | E | Q | G | P | E | I | D | N | Q | E |
| Query Conservation |   |
  |
|
|   |   |   |
|
|
|   |   |
|   |   |
|
|   |   | . |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
| . | . | . | . | . | . |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |
|   |   |
|
| Template Sequence |   |
I | G | G | G | G | V | N | A | V | N | R | M | I | E | Q | G | L | K | G | V | E | F | I | A | I | N | T | D | . |
. |
. |
. |
. |
. |
A | Q | A | L | L | M | S | D | A | D | V | K | L | D | V | G | R | D | S | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | D | P | E | V | G | R | K | A |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  | S |
| . | . | . | . | . | . |  |  |  |  |  |  |
|
|
| S |  |  |  |  |
|
| T | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 70 | . | . | . |
|   |
|   |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | A | G | F | I | K | H | F | E | Q | L | L | E | K | V | E | A | V | A | I | S | G | S | L | P | K | G | L | N | Q | D | Y | Y | A | Q | I | I | E | R | C | Q | N | K | G | V | P | V | I |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|
| Template Sequence |   |
A | E | D | A | K | D | E | I | E | E | L | L | R | G | A | D | M | V | F | V | T | A | G | E | G | G | G | T | G | T | G | G | A | P | V | V | A | S | I | A | R | K | L | G | A | L | T | V |
| Template Known Secondary structure |   |
 |  |  | T |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|