Return to main results Retrieve Phyre Job Id

Job DescriptionP0A0B9
Confidence56.38%DateTue Jul 17 17:05:05 BST 2012
Rank80Aligned Residues79
% Identity19%Templated1j6ua1
SCOP infoMurCD N-terminal domain MurCD N-terminal domain MurCD N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.. .......50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 


.


























Query SS confidence 







.






































































Query Sequence  AGGKGLNV. TRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQE
Query Conservation   

   

.
  
  

     
   

  
  
   
   

    
     
                          
Alig confidence 







.













....



















.................................
Template Conservation   
 

 



  
   
  
   ....
         
   
     .................................
Template Sequence  IGGIGXSAVALHEFSNGNDVYGS. . . . NIEETERTAYLRKLGIPIFV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTSTT
....
SS

TT

S.................................
Template Predicted Secondary structure 





....






.................................
Template SS confidence 















































































   8.10.........20.........30 .........40.........50
 
   114.....120.........130.........140.........150.........160.
Predicted Secondary structure 

















Query SS confidence 















































Query Sequence  AAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVI
Query Conservation                   
                            
 
Alig confidence  .....
























......











Template Conservation  .....
     
   
 

 



    
 ......
  
   



 
Template Sequence  . . . . . PHSADNWYDPDLVIKTPAVRDDNPE. . . . . . IVRARXERVPIE
Template Known Secondary structure  .....S

TTS



S
TT

TT
......TT

Template Predicted Secondary structure  .....















......



Template SS confidence 















































   51........60.........70..... ....80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions