Job Description P0A0B9 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 35 Aligned Residues 275 % Identity 15% Template c4ebuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxygluconokinase; PDBTitle: crystal structure of a sugar kinase (target efi-502312) from2 oceanicola granulosus, with bound amp/adp crystal form i Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.									.
Query SS confidence																																																						.	.									.
Query Sequence		M	I	L	T	L	T	L	N	P	S	V	D	I	S	Y	P	L	T	A	L	K	L	D	D	V	N	R	V	Q	E	V	S	K	T	A	G	G	K	G	L	N	V	T	R	V	L	A	Q	V	G	E	P	.	.	V	L	A	S	G	F	I	G	.	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K
Query Conservation																																																						.	.									.
Alig confidence																.	.	.	.	.	.	.	.	.																														.	.									.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		M	H	I	L	S	I	G	E	C	M	A	E	L	A	.	.	.	.	.	.	.	.	.	P	A	D	L	P	G	T	Y	R	L	G	F	A	G	D	T	F	N	T	A	W	Y	L	A	R	L	R	P	E	S	R	I	S	Y	F	S	A	I	G	D	D	A	L	S	Q	Q	M	R	A	A	M	S	A	A	G	I	D
Template Known Secondary structure								S								.	.	.	.	.	.	.	.	.			S	S	T	T																						T	T	S										S	S													T	T		B
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		H	A	F	Y	N	I	K	G	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	.	.	.	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q
Query Conservation																																																												.	.	.
Alig confidence																																	.	.	.																									.	.	.
Template Conservation																																	.	.	.
Template Sequence		G	G	G	L	R	V	I	P	G	R	T	V	G	L	Y	L	I	T	L	R	S	F	A	Y	W	R	G	Q	S	A	A	.	.	.	R	E	L	A	G	D	A	D	A	L	A	A	A	M	A	R	A	D	V	V	Y	F	S	G	I	T	L	A	I	L	D	Q	C	G	R	A	T	L	L	R	A	L	A	Q	A	R
Template Known Secondary structure			T	T					T	T																		T	T		G	G	.	.	.	G	G	T	T	S										T	T		S												S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.										.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.
Query Sequence		N	K	G	V	P	V	I	L	D	C	.	.	.	.	.	.	.	.	.	S	G	A	T	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G	I	E	W	I	I	V	S	L	G	A
Query Conservation												.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		A	T	G	R	T	I	A	F	D	P	N	L	R	P	R	L	W	A	G	T	G	E	M	T	E	T	I	M	Q	G	A	A	V	S	D	I	A	L	P	S	F	E	D	E	A	A	W	F	G	D	A	G	.	.	.	.	.	.	P	D	A	T	A	D	R	Y	A	R	A	G	V	R	S	V	V	V	K	N	G	P
Template Known Secondary structure				T											G	G	G	S	S														T	T		S					B								T			S	S	.	.	.	.	.	.											T	T		S					B		T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		Q	G	A	F	A	K	H	N	H	T	F	Y	R	V	N	I	P	T	I	.	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E	A	Q	T	G	Y	V
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		H	A	V	H	F	L	Q	D	G	R	R	G	R	V	P	V	P	P	V	A	Q	V	V	D	T	T	A	A	G	D	S	F	N	A	G	L	L	D	S	V	L	A	G	Q	P	L	E	T	A	I	A	A	A	A	A	L	A	G	Q	V	V	Q	G	K	G	A	L	V	E
Template Known Secondary structure		S							T	T											S	S					T	T															T	T																		T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions