Job Description P0A0B9 Confidence 99.70% Date Tue Jul 17 17:05:05 BST 2012 Rank 53 Aligned Residues 236 % Identity 13% Template c3zs7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyridoxal kinase; PDBTitle: crystal structure of pyridoxal kinase from trypanosoma2 brucei Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A	F	Y	N	I	K	G	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	.	V	A	I	S	G	S	L	P	K	G	L	N
Query Conservation																																																																					.
Alig confidence																					.	.	.	.	.	.	.	.	.																																								.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		N	K	A	A	T	F	P	L	Q	L	H	G	F	D	V	D	G	I	N	.	.	.	.	.	.	.	.	.	T	V	C	L	S	N	H	S	G	Y	P	V	I	R	G	H	R	M	S	L	Q	E	Y	D	E	L	M	E	G	V	R	A	N	N	F	L	S	N	Y	R	Y	I	L	T	G	Y	I	N	N	V	D	I
Template Known Secondary structure												T	T								.	.	.	.	.	.	.	.	.					S	S		T	T	S	S																						T	T		G	G	G		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		143	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.										.
Query SS confidence															.	.	.	.	.	.										.
Query Sequence		Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	.	.	.	.	.	.	K	G	V	P	V	I	L	D	C	.	S	G	A	T	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G
Query Conservation															.	.	.	.	.	.										.
Alig confidence															.	.	.	.	.	.										.																																				.
Template Conservation																																																																		.
Template Sequence		I	G	R	I	R	D	T	L	K	E	V	R	E	L	R	E	K	E	D	K	K	L	T	F	I	C	D	P	V	M	K	E	V	L	D	A	Y	R	E	L	V	P	L	A	D	I	V	T	P	N	Y	F	E	A	S	L	L	S	G	V	T	V	N	D	.	L	S	S	A	I	L	A	A	D	W	F	H	N	C	G
Template Known Secondary structure																			T	T													T									G	G	G		S														S	S				S	.															T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																						.	.																																						.
Query SS confidence														.	.	.	.	.	.	.																						.	.																																						.
Query Sequence		I	E	W	I	I	V	S	L	G	A	Q	G	.	.	.	.	.	.	.	A	F	A	K	H	N	H	T	F	Y	R	V	N	I	P	T	I	S	V	L	N	.	.	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	.
Query Conservation														.	.	.	.	.	.	.																						.	.																																						.
Alig confidence														.	.	.	.	.	.	.																						.	.									.																													.
Template Conservation																																																				.
Template Sequence		V	A	H	V	I	I	K	S	F	R	N	P	T	H	L	R	F	L	Y	S	V	K	E	G	S	E	A	A	V	R	R	F	S	G	V	V	P	Y	H	E	G	R	Y	T	G	T	G	D	V	F	.	A	A	C	L	L	A	F	S	H	S	H	P	M	D	V	A	I	G	K	S	M	A	V	L	Q	E	L	I	I
Template Known Secondary structure			S											S											S	T	T	S													S	S		B	T	T						.									T	T	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
						286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Q	E	A	Q	T	G	Y	V	N	L	N	N	Y	D	D	L	F	N	Q	I	E	V	L	E	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		A	T	R	K	S	R	E	L	R	V	V	A	S	P	Q	V	V	L	Q	P	S	T	V	V	D	V	K	P	I
Template Known Secondary structure			T	T			B				S	T	T							S			S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions