Job Description P0A0B9 Confidence 99.56% Date Tue Jul 17 17:05:05 BST 2012 Rank 55 Aligned Residues 174 % Identity 12% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V	P	V	I	L	D	C	.	.	.	.	S	G	A	T	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.
Template Conservation
Template Sequence		K	E	V	V	F	Q	T	L	E	S	N	L	K	D	M	K	C	N	V	I	K	T	G	M	L	T	A	A	A	I	E	V	L	H	E	K	L	L	Q	L	G	E	N	R	P	K	L	V	V	D	P	V	L	V	A	K	D	I	V	S	L	I	T	E	K	V	A	P	F	A	D	I	L	T	P	N	I	P	E	C
Template Known Secondary structure																S			S						S																	G	G	G																							T	G	G	G		S					B
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure											.																	.																		.	.
Query SS confidence											.																	.																		.	.
Query Sequence		Y	Q	L	L	N	Q	P	L	D	.	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	.	G	I	E	W	I	I	V	S	L	G	A	Q	G	A	F	A	K	.	.	H	N	H	T	F	Y	R	V	N	I	P	T	I	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L
Query Conservation											.																	.																		.	.
Alig confidence											.																	.																		.	.
Template Conservation
Template Sequence		Y	K	L	L	G	E	E	R	K	V	N	G	L	Q	D	I	F	Q	I	A	K	D	L	A	K	I	T	K	C	S	N	I	L	V	K	G	G	H	I	T	D	V	L	F	L	G	A	E	Q	K	F	I	I	F	K	G	N	F	V	N	T	T	H	T	H	G	T	G	C	T	L	A	S	A	I	A	S	N	L	A
Template Known Secondary structure					T	T	S					S	S																		S																T	T	T	T													S			B	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	Y	S	L	P	Q	S	V	Y	G	G	I	E	Y	V	Q	N	A	V	A	I
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions