Job Description P0A0B9 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 12 Aligned Residues 291 % Identity 17% Template c3pl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:sugar kinase, ribokinase family; PDBTitle: crystal structure of a 5-keto-2-deoxygluconokinase (ncgl0155, cgl0158)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.89 a3 resolution Resolution 1.89 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	T	L	T	L	N	P	S	V	D	I	S	Y	P	L	T	A	L	K	L	D	D	V	N	R	V	Q	E	V	S	K	T	A	G	G	K	G	L	N	V	T	R	V	L	A	Q	V	G	E	P	V	L	A	S	G	F	I	G	.	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A	F	Y
Query Conservation																																																												.
Alig confidence																								.	.	.																																		.
Template Conservation																								.	.	.
Template Sequence		V	L	A	I	G	R	L	G	V	D	I	Y	P	L	Q	S	G	V	G	L	A	D	.	.	.	V	Q	S	F	G	K	Y	L	G	G	S	A	A	N	V	S	V	A	A	A	R	H	G	H	N	S	A	L	L	S	R	V	G	N	D	P	F	G	E	Y	L	L	A	E	L	E	R	L	G	V	D	N	Q	Y	V
Template Known Secondary structure						S									S	S	T	T			T	T	T	.	.	.																						T	T											S	S													T	T		B		T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		N	I	K	G	.	.	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V	P
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		A	T	D	Q	T	F	K	T	P	V	T	F	C	E	I	F	P	P	D	D	F	P	L	Y	F	Y	R	E	P	K	A	P	D	L	N	I	E	S	A	D	V	S	L	D	D	V	R	E	A	D	I	L	W	F	T	L	T	G	F	S	E	E	P	S	R	G	T	H	R	E	I	L	T	T	R	A	N	R	R	H
Template Known Secondary structure					S	S	S										B	T	T	T	B									S			G	G	G	G			G	G	G	S									S						G	G	G	G	S	S	T	T													T	T		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.
Query Sequence		V	I	L	D	C	S	G	.	.	.	.	.	.	.	.	.	A	T	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G	I	E	W	I	I	V	S	L	G	A	Q	G	A	F	A
Query Conservation									.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		T	I	F	D	L	D	Y	R	P	X	F	W	E	S	P	E	E	A	T	K	Q	A	E	W	A	L	Q	H	S	T	V	A	V	G	N	K	E	E	C	E	I	A	V	G	E	.	.	.	.	.	.	T	E	P	E	R	A	G	R	A	L	L	E	R	G	V	E	L	A	I	V	K	Q	G	P	K	G	V	X	A
Template Known Secondary structure										G	G	G	S	S														T	T		S														S		.	.	.	.	.	.		S											T	T		S								T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		K	H	N	H	T	F	Y	R	V	N	I	P	T	I	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E	A	Q	T	.	.	G	Y	V	N	L	N	N	Y	D	D	L	F
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		X	T	K	D	E	T	V	E	V	P	P	F	F	V	D	V	I	N	G	L	G	A	G	D	A	F	G	G	A	L	C	H	G	L	L	S	E	W	P	L	E	K	V	L	R	F	A	N	T	A	G	A	L	V	A	S	R	L	E	C	S	T	A	X	P	T	T	D	E	V	E	A	S	L
Template Known Secondary structure				S	S													S			T	T															T	T																			T	S	S		S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions