Job Description P0A0B9 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 27 Aligned Residues 273 % Identity 16% Template c3go6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribokinase rbsk; PDBTitle: crystal structure of m. tuberculosis ribokinase (rv2436) in2 complex with ribose and amp-pnp Resolution 1.98 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																																								.
Query SS confidence																						.																																								.
Query Sequence		I	L	T	L	T	L	N	P	S	V	D	I	S	Y	P	L	T	A	L	K	.	L	D	D	V	N	R	V	Q	E	V	S	K	T	A	G	G	K	G	L	N	V	T	R	V	L	A	Q	V	G	E	P	V	L	A	S	G	F	I	G	.	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A
Query Conservation																						.																																								.
Alig confidence																						.																																								.
Template Conservation
Template Sequence		R	V	C	V	V	G	S	V	N	M	D	L	T	F	V	V	D	A	L	P	R	P	G	E	T	V	L	A	A	S	L	T	R	T	P	G	G	K	G	A	N	Q	A	V	A	A	A	R	A	G	A	Q	V	Q	F	S	G	A	F	G	D	D	P	A	A	A	Q	L	R	A	H	L	R	A	N	A	V	G	L	D
Template Known Secondary structure																		S	S				T	T						S																				T	T											S	S													T	T		B		T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	Y	N	I	K	.	G	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V
Query Conservation							.
Alig confidence							.																									.	.	.	.	.	.																						.	.	.	.
Template Conservation																																.	.	.	.	.	.																						.	.	.	.
Template Sequence		R	T	V	T	V	P	G	P	S	G	T	A	I	I	V	V	D	A	S	A	E	N	T	V	L	V	A	P	G	A	.	.	.	.	.	.	N	A	H	L	T	P	V	P	S	A	V	A	N	C	D	V	L	L	T	Q	L	.	.	.	.	E	I	P	V	A	T	A	L	A	A	A	R	A	A	Q	S	A	D	A
Template Known Secondary structure		T					S	S											T	T										G	G	.	.	.	.	.	.	G	G	G					G	G	G	G	T	T		S						S	.	.	.	.	S	S															T	T
Template Predicted Secondary structure																																.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		159	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		P	V	I	L	D	C	S	G	.	.	A	T	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G	I	E	W	I	I	V	S	L	G	A	Q	G	A	F	A	K	H	N	H	T	F
Query Conservation										.	.
Alig confidence										.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	M	V	N	A	S	P	A	G	Q	D	R	S	S	L	Q	D	L	A	A	I	A	D	V	V	I	A	N	E	H	E	A	N	D	W	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	P	T	H	F	V	I	T	L	G	V	R	G	A	R	Y	V	G	A	D	G	V
Template Known Secondary structure									S	S				T	G	G	G								S											T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S							G	G	G							T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																						.	.
Query SS confidence																																			.	.	.	.																						.	.
Query Sequence		Y	R	V	N	I	P	T	I	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	.	.	.	.	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E	A	Q	T	.	.	G	Y	V	N	L	N	N	Y	D	D	L	F	N	Q
Query Conservation																																			.	.	.	.																						.	.
Alig confidence																																			.	.	.	.																						.	.
Template Conservation
Template Sequence		F	E	V	P	A	P	T	V	T	P	V	D	T	A	G	A	G	D	V	F	A	G	V	L	A	A	N	W	P	R	N	P	G	S	P	A	E	R	L	R	A	L	R	R	A	C	A	A	G	A	L	A	T	L	V	S	G	V	G	D	C	A	P	A	A	A	A	I	D	A	A	L	R	A
Template Known Secondary structure												S			T	T													S			T	T																					T	T	S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions