Job Description P0A0B9 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 23 Aligned Residues 283 % Identity 16% Template c3b1qD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ribokinase, putative; PDBTitle: structure of burkholderia thailandensis nucleoside kinase (bthnk) in2 complex with inosine Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	T	L	N	P	S	V	D	I	S	Y	P	L	T	A	L	K	L	D	D	V	N	R	V	Q	E	V	S	K	T	A	G	G	K	G	L	N	V	T	R	V	L	A	Q	V	G	E	P	V	L	A	S	G	F	I	G	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A	F	Y	N
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		T	L	I	C	G	S	I	A	Y	D	N	I	M	T	F	E	G	R	F	.	N	L	S	F	L	V	P	T	M	R	R	E	F	G	G	C	A	G	N	I	A	Y	A	L	N	L	L	G	G	D	A	R	M	M	G	T	L	G	A	V	D	A	Q	P	Y	L	D	R	M	D	A	L	G	L	S	R	E	Y	V	R
Template Known Secondary structure						S											S	S			.																												T											T	T	T												T
Template Predicted Secondary structure																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		I	K	G	.	.	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V	P	V
Query Conservation					.	.
Alig confidence					.	.																																			.	.	.	.	.											.	.	.	.	.
Template Conservation																																									.	.	.	.	.											.	.	.	.	.
Template Sequence		V	L	P	D	T	Y	S	A	Q	A	M	I	T	T	D	L	D	N	N	Q	I	T	A	F	H	P	G	A	M	M	Q	S	H	V	N	H	A	G	E	.	.	.	.	.	A	K	D	I	K	L	A	I	V	G	.	.	.	.	.	P	D	G	F	Q	G	M	V	Q	H	T	E	E	L	A	Q	A	G	V	P	F
Template Known Secondary structure				T	T												T	T										G	G	G	G	G	G	G	G	S		G	G	G	.	.	.	.	.			S		S						.	.	.	.	.	S																	T
Template Predicted Secondary structure																																									.	.	.	.	.											.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		I	L	D	C	S	G	A	T	.	.	.	.	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G	I	E	W	I	I	V	S	L	G	A	Q	G	A	F	A	K	H	N	H	T	F
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		I	F	D	P	G	Q	G	L	P	L	F	D	G	A	T	L	R	R	S	I	E	L	A	T	Y	I	A	V	N	D	Y	E	A	K	L	V	C	D	K	T	G	W	S	.	.	.	.	.	.	.	.	.	E	D	E	I	A	S	R	V	Q	A	L	I	I	T	R	G	E	H	G	A	T	I	R	H	R	D	G	T
Template Known Secondary structure						G	G	G	G	G	G														S																				.	.	.	.	.	.	.	.	.						T	T	S	S							G	G	G							T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		237	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure										.																																															.	.
Query SS confidence										.																																															.	.
Query Sequence		Y	R	V	N	I	P	T	I	.	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E	A	Q	T	.	.	G	Y	V	N	L	N	N	Y	D	D	L	F	N	Q	I
Query Conservation										.																																															.	.
Alig confidence										.																																															.	.
Template Conservation
Template Sequence		E	Q	I	P	A	V	R	A	E	R	V	I	D	P	T	G	C	G	D	A	F	R	G	G	L	L	Y	G	I	E	H	G	F	D	W	A	T	A	G	R	L	A	S	L	M	G	A	L	K	I	A	H	Q	G	P	Q	T	Y	A	P	T	R	A	E	I	D	A	R	F	E	T	A
Template Known Secondary structure										S						T	T															T	T																			T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions