Job Description P0A0B9 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 18 Aligned Residues 295 % Identity 15% Template c2nwhA_ PDB info PDB header:signaling protein,transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: carbohydrate kinase from agrobacterium tumefaciens Resolution 1.86 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	T	L	T	L	N	P	S	V	D	I	S	Y	P	L	T	A	L	K	L	D	D	V	N	R	V	Q	E	V	S	K	T	A	G	G	K	G	L	N	V	T	R	V	L	A	Q	V	G	E	P	V	L	A	S	G	F	I	G	.	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A	F	Y
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		I	L	V	L	G	G	A	H	I	D	R	R	G	M	I	E	T	E	T	A	P	G	A	S	N	P	G	S	W	M	E	E	A	G	G	G	G	F	N	A	A	R	N	L	S	R	L	G	F	E	V	R	I	I	A	P	R	G	G	D	V	T	G	E	V	V	A	E	A	A	R	Q	A	G	V	E	D	T	P	F
Template Known Secondary structure						S											S	S	S			T	T	S																								T	T											S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																			.	.
Query SS confidence					.																			.	.
Query Sequence		N	I	K	.	G	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I	.	.	L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V
Query Conservation					.																			.	.
Alig confidence					.																			.	.																																		.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		T	F	L	D	R	R	T	P	S	Y	T	A	I	L	E	R	D	G	N	L	V	I	A	L	A	D	M	D	L	Y	K	L	F	T	P	R	R	L	K	V	R	A	V	R	E	A	I	I	A	S	D	F	L	L	C	D	A	.	.	.	.	N	L	P	E	D	T	L	T	A	L	G	L	I	A	R	A	C	E	K
Template Known Secondary structure				T	T	S											T	T	S										G	G	G	G	G							T	S											S						T	.	.	.	.	T	S															T	T
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.
Predicted Secondary structure								.																																																																							.
Query SS confidence								.																																																																							.
Query Sequence		P	V	I	L	D	C	.	S	G	A	T	L	Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G	I	E	W	I	I	V	S	L	G	A	Q	G	A	F	A	K	H	N	H	.	T	F
Query Conservation								.																																																																							.
Alig confidence								.																																		.	.	.	.	.	.	.	.	.																													.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		P	L	A	A	I	A	I	S	P	A	K	A	V	K	L	K	A	A	L	G	D	I	D	I	L	F	M	N	E	A	E	A	R	A	L	T	G	V	R	D	.	.	.	.	.	.	.	.	.	W	P	N	I	L	R	K	A	G	L	S	G	G	V	V	T	R	G	A	S	E	V	V	A	F	N	G	T	E	K	A
Template Known Secondary structure									S					G	G	G	T	T	T	G	G	G		S																T	T	.	.	.	.	.	.	.	.	.								T	T									T	T	T							S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.										200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Y	R	V	N	I	P	T	I	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E	A	Q	T	.	.	G	Y	V	N	L	N	N	Y	D	D	L	F	N	Q	I	E	V	L	E	V
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		I	L	H	P	P	L	I	R	E	V	K	D	V	T	G	A	G	D	A	M	A	S	G	Y	L	A	A	I	A	E	G	K	T	I	R	E	A	L	R	Q	G	A	A	A	A	A	I	T	V	Q	S	S	F	A	T	S	Q	D	L	S	K	D	S	V	E	A	M	L	G	L	V	P	Q	A	E	M
Template Known Secondary structure								S	S	S		S					S	S													T	T																			S	S	T	T			G	G	G											T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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